KEGG   Variovorax paradoxus B4: VAPA_1c05930
Entry
VAPA_1c05930      CDS       T02835                                 
Name
(GenBank) putative type IV / VI secretion system protein, DotU family
  KO
K11892  type VI secretion system protein ImpK
Organism
vpd  Variovorax paradoxus B4
Pathway
vpd03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:vpd00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    VAPA_1c05930
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vpd02044]
    VAPA_1c05930
Secretion system [BR:vpd02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   VAPA_1c05930
SSDB
Motif
Pfam: DotU OmpA
Other DBs
NCBI-ProteinID: AGU47723
UniProt: T1X560
LinkDB
Position
1:647672..649000
AA seq 442 aa
MTTPDPFAAFESERTVIKPKPRTPAGTPPPAAAPAPFFGGVDPTPAVDVGEIGLLNPLVS
AAGKLLVLIGKLRNLAQPPNVPALRASTADAVNQFDAAARRAGVSNESVLAARYVLCTAL
DEAVANTPWGVQAGWNKQSLLVQFHNETWGGEKVFQLLAKLAQDVPTHRQLLELIYSVLA
LGFEGRYRVVDNGRAQLDSVRQRLADLIAKDRPPLEAELSPHWRGQGAGTVRLRESLPLW
VFAAGFALLLALAWFGLRLTLNYRSDTTYAAVSGLRVPNIQIAPPAAPAKSPRLARFLEP
EIKQGLVTVTDEADRSVVRLRGDSFFGSGSAEPMAASLPVLRRIGQALAEVKGEVLITGH
SDNQPIRSLRYPSNWHLSAARADAVKGALTTLVDPARMRSDGKADAEPVAANDTPANRAR
NRRVDIVLLSEPDRVAAAGVTK
NT seq 1329 nt   +upstreamnt  +downstreamnt
atgacaacacccgatcccttcgccgccttcgagtcggagcgcacggtcatcaagccgaag
ccgcgcacgccggccggcacgccgccgcctgctgcggcaccggcgcctttcttcggcggc
gttgatccgacacccgccgtcgacgtcggcgagatcgggctgctcaatccgctggtctcg
gccgcgggcaagctgctggtgctgatcggaaagctgcgcaaccttgcgcagccgcccaac
gtgccggccctgcgcgcctccaccgccgacgcggtgaaccagttcgacgccgccgcgcgc
cgtgccggcgtcagcaacgaatcggtgctggccgcgcgctatgtgctgtgcaccgcgctg
gacgaggccgtggccaacacgccctggggcgtgcaggccggctggaacaagcagagcctg
ctggtgcagttccacaacgagacctggggcggcgagaaggtgttccagttgctcgccaag
ctcgcgcaggacgtgcccacgcaccgccagctgctggagctgatctacagcgtgctcgcg
ctcggcttcgaaggccgctaccgcgtggtcgacaacggccgcgcgcagctcgattcggtg
cgccagcgcctggccgacctgatcgccaaggaccgtccgccgctcgaagccgagctctcg
ccgcattggcgcgggcagggcgcgggcacggtgcggctgcgcgaatcgctgccgctgtgg
gtgttcgcggccggcttcgccctgctgctcgcgctggcctggttcggcctgcggctcacg
ctcaactaccgctccgacaccacctatgccgcagtgtcgggcctgcgcgtgcccaacatc
cagatcgcgccgcccgccgcgccggccaagtcgccgcggctcgcgcgcttcctcgagccc
gagatcaagcagggcctcgtcaccgtgaccgacgaggccgaccgcagcgtggtgcggctg
cgcggcgactccttcttcggctccggcagcgccgagccgatggccgcatcgctgccggtg
ctgcgccgcatcggccaggcgctggccgaagtgaagggcgaggtgctgatcaccggccac
tccgacaaccagccgatccgctcgctgcgctatccctccaactggcacctgtcggccgcg
cgtgccgatgcggtgaagggcgcgctcaccacgctggtcgatccggcacgcatgcgctcc
gacggcaaggccgacgccgagcccgtggccgccaacgacacgccggccaaccgcgcgcgc
aaccggcgcgtcgacatcgtgctgctgtccgagccggaccgggtcgctgccgcgggagtg
acgaaatga

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