KEGG   Variovorax paradoxus B4: VAPA_1c06070
Entry
VAPA_1c06070      CDS       T02835                                 
Symbol
clpV1
Name
(GenBank) type VI secretion ATPase, ClpV1 family
  KO
K11907  type VI secretion system protein VasG
Organism
vpd  Variovorax paradoxus B4
Pathway
vpd03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:vpd00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    VAPA_1c06070 (clpV1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vpd02044]
    VAPA_1c06070 (clpV1)
Secretion system [BR:vpd02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   VAPA_1c06070 (clpV1)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA ClpB_D2-small AAA_16 AAA_5 AAA_22 Sigma54_activat Zeta_toxin AAA_7 TniB AAA_14 ATPase_2 NACHT nSTAND3 AAA_18 TsaE Cyclin_N DUF815 Clp_N CbiA AAA_19 Hpr_kinase_C Torsin HerA_C SRP54 T2SSE MlrC_C
Other DBs
NCBI-ProteinID: AGU47737
UniProt: T1X4A8
LinkDB
Position
1:667391..670120
AA seq 909 aa
MSEISRTALFGKLNSLAYKAIEGATVFCKMRGNPYVELEHWFAQLLQAQDSDLHRVIQHY
GLDVSVIAKDMTAALDRLPRGATAISDFSPHIENAIERAWTYATLQFGEAQVRTGYILVG
MLKTQSLRNPLFGLSRQFEKIKVEDLADNFVKICDASPESQMRAQDGTGMGSGAPGEDSG
AMAPAAMGKGDALKKFAVDLTEKARKGEMDPITGRDEEIRQIVDILMRRRQNNPLLTGEA
GVGKTAVVEGFAQRLARGDVPPQLKDVKLLTLDIGLLQAGASMKGEFEQRLRQVIDEVQS
SPTPIILFIDEIHTLVGAGGAAGTGDAANLLKPALARGNLRTIGATTWAEYKKYIEKDPA
LTRRFQVVQVPEPDEVKAILMLRGVASVLEKHHRVQLLDEAIEAAVKLSHRYIPARQLPD
KAVSLLDTACARVAVSQHATPPEVEDCMRRIEGLTVEQEIIGREEAIGIDVTKRAVQVAA
LLLESNGQLETLNARWKEEKGLVDRLLELRAKLRAGNKPVDAASTEGEAKADVPPPQPSP
GGGGSEDRAALLEELHALQAKIHAVQGESPLILPSVDEQAVASVVADWTGIPVGRMVKNE
VEAVLKLADTLNQRVIGQKHGLEMIARRIQTSRARLDNPQKPIGVFMLCGTSGVGKTETA
LALAEALYGGEQNIITINMSEFQEAHTVSTLKGAPPGYVGYGEGGILTEAVRRRPYSVVL
LDEVEKAHPDVHEIFFQVFDKGWMEDGEGRMIDFKNTIILLTTNAGSELVMSMCRDPELL
PDSNALADALKAPLMKVFPPALLGRIVTIPYYPLSPDMMKKIVRLQLGRIKKRVETNHGV
PFEYSDAVVDQVVARCQDPESGGRVIDAILTNTVLPTISVEYLQRLASGGEIRRVALDVK
DADFTYAFD
NT seq 2730 nt   +upstreamnt  +downstreamnt
atgagtgaaatcagtcgcaccgcccttttcggcaagctcaactcgctggcctacaaggcc
atcgaaggcgccacggtgttctgcaagatgcggggcaatccgtacgtggaactggagcac
tggttcgcccagctgctgcaggcgcaagactccgacctgcatcgcgtgatccagcactac
ggcctcgacgtctccgtgatcgccaaggacatgacggccgcactcgaccgcctgccacgc
ggcgccaccgccatcagcgacttctccccgcacatcgagaacgccatcgaacgcgcctgg
acctatgccacgctgcagttcggcgaggcgcaggtgcgcaccggctacatcctggtgggc
atgctgaagacgcagagcctgcgcaatccgctgttcggcctgtccaggcagttcgagaag
atcaaggtcgaggacctggccgacaacttcgtgaagatttgcgacgcctcgcccgaatcg
cagatgcgcgcgcaggacggcaccggcatgggcagcggcgcaccgggcgaagactcgggc
gccatggcacccgccgccatgggcaagggcgatgcgctcaagaagttcgcggtcgacctc
accgagaaggccaggaagggcgagatggacccgatcaccgggcgcgacgaggagatccgc
cagatcgtcgacatcctgatgcgccgccgccagaacaatccgctgctgacgggcgaggcc
ggcgtcggcaagacggccgtggtcgaaggtttcgcgcagcggctcgcacgcggcgacgtg
ccgccgcagctgaaggacgtgaagctgctcacgctcgacatcggcctgctgcaggccggc
gccagcatgaagggcgagttcgagcagcgcctgcgccaggtgatcgacgaggtgcagagc
tcgccgacgcccatcattctcttcatcgacgagatccacacgctcgtgggtgcgggcggc
gcggccggcaccggcgatgcggccaacctgctgaagccggcgctggcgcgcggcaacctg
cgcaccatcggcgccaccacctgggccgagtacaagaagtacatcgagaaagacccggcg
ctgacaaggcgcttccaggtcgtgcaggtgcccgagcccgacgaggtgaaggccatcctg
atgctgcgcggcgtggccagcgtgctcgagaagcaccaccgcgtgcagctgctcgacgag
gccatcgaggcggccgtgaagctgagccaccgctacattcccgcgcgccaattgcccgac
aaggccgtgagcctgctcgacacggcgtgcgcgcgcgtggccgtgtcgcagcacgccacg
ccgcccgaggtggaggactgcatgcgccgcatcgaggggctcacggtcgagcaggagatc
atcggccgcgaggaagccatcggcatcgacgtgaccaagcgcgcggtgcaggtggcggcg
ctgctgctggaatcgaatgggcagctggaaacgctcaacgcccgctggaaggaagagaag
gggctggtcgatcggttgctcgaattgcgtgcgaagctgcgggcggggaacaagccggtg
gatgcggcgtccaccgagggtgaggcgaaggccgacgtgcccccaccccaaccctctccc
ggcgggggagggagcgaagaccgggccgcgctgctcgaagagctgcatgcgctgcaggcc
aagatccatgcggtgcagggcgaatcgccgctgatcctgccttcggtcgacgagcaggcc
gtggcctcggtggtggccgactggaccggcattcccgtcggccgcatggtcaagaacgaa
gtcgaggcggtgctcaagctcgccgacacgctcaaccagcgcgtcatcggccagaagcac
ggcctggagatgatcgcgcggcgcattcaaacgtctcgcgcgcggctggacaacccgcaa
aagccgatcggcgtgttcatgctgtgcggcacctcgggcgtgggcaagaccgagaccgca
ctggcactggccgaggccctgtacggcggcgagcagaacatcatcaccatcaacatgagc
gaattccaggaggcgcataccgtctccacgctcaagggcgcgccgccaggctacgtgggc
tacggcgaaggcggcatcctgaccgaggccgtgcgccgccggccctacagcgtggtgctg
ctcgacgaggtcgagaaagcccaccccgacgtgcacgagatcttcttccaggtgttcgac
aagggctggatggaagacggcgagggccgcatgatcgatttcaagaacacgatcatcctg
ctcaccaccaacgccggcagcgagctcgtgatgagcatgtgccgcgaccccgagctgctg
cccgattcgaacgcactggccgatgcgctgaaggcgccgctcatgaaagtgttcccacct
gcgctgctgggccgcatcgtcaccattccctactacccgctctcgccggacatgatgaag
aagatcgtgcggctgcagctgggccgcatcaagaagcgcgtggagaccaaccacggcgtg
cccttcgagtacagcgacgcggtggtcgaccaggtggttgcgcgctgccaggatccggag
tcgggcgggcgcgtgatcgacgcgatcctgaccaacacggtgctgccaacgatttctgtc
gagtacctgcagcggctggcctcgggcggcgagatccgccgcgtcgcgctggatgtgaag
gatgccgacttcacctacgcattcgactga

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