Variovorax paradoxus B4: VAPA_1c08170
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Entry
VAPA_1c08170 CDS
T02835
Symbol
rmlC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase RmlC
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd00521
Streptomycin biosynthesis
vpd00523
Polyketide sugar unit biosynthesis
vpd00541
O-Antigen nucleotide sugar biosynthesis
vpd01100
Metabolic pathways
vpd01110
Biosynthesis of secondary metabolites
vpd01250
Biosynthesis of nucleotide sugars
Module
vpd_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
VAPA_1c08170 (rmlC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
VAPA_1c08170 (rmlC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
VAPA_1c08170 (rmlC)
Enzymes [BR:
vpd01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
VAPA_1c08170 (rmlC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
AGU47937
UniProt:
T1X4U2
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All DBs
Position
1:895271..895819
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AA seq
182 aa
AA seq
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MKATPTAIPEVLIIEPKVFGDARGFFYESFNGKAFDEAVGRHIEFVQDNHSRSAKGVLRG
LHYQIQQPQGKLVRVAQGAVFDVAVDIRKSSSTFGQWVGVELTADNHKQLWIPAGFAHAF
LVLSATADFLYKTTDYYAPAYERCIAWNDVAVGIEWPEIGMAPVLSAKDQAGVSLNQAET
FD
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
gtgaaggccacgccgaccgccattcccgaggtgctgatcatcgagccgaaggtcttcggc
gatgcgcgcggcttcttctacgagagcttcaacggcaaggcgttcgacgaggcggtcggg
cggcacatcgagttcgtgcaggacaaccattcgcgctcggccaagggcgtgctgcgcgga
ttgcactatcagatccagcagccgcagggcaagctggtgcgtgtggcgcaaggtgcggtg
ttcgatgtggcggtggacatccgcaagtcgtcgtctaccttcggacaatgggtgggcgtg
gaactgactgcggacaatcacaaacagctgtggataccggccgggttcgcgcatgctttt
cttgtgcttagcgcgacggcagacttcctctacaagaccaccgactactatgcgccggcg
tatgagcgctgcatcgcgtggaacgatgtggcagtgggcatcgagtggcctgagatcgga
atggcccccgtgttgtccgccaaagaccaggccggtgtttcactgaaccaagctgagacc
ttcgactaa
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