Variovorax paradoxus B4: VAPA_1c08590
Help
Entry
VAPA_1c08590 CDS
T02835
Symbol
leuC1
Name
(GenBank) 3-isopropylmalate dehydratase, large subunit LeuC
KO
K01703
3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:
4.2.1.33
4.2.1.35
]
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd00290
Valine, leucine and isoleucine biosynthesis
vpd00660
C5-Branched dibasic acid metabolism
vpd01100
Metabolic pathways
vpd01110
Biosynthesis of secondary metabolites
vpd01210
2-Oxocarboxylic acid metabolism
vpd01230
Biosynthesis of amino acids
Module
vpd_M00432
Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00660 C5-Branched dibasic acid metabolism
VAPA_1c08590 (leuC1)
09105 Amino acid metabolism
00290 Valine, leucine and isoleucine biosynthesis
VAPA_1c08590 (leuC1)
Enzymes [BR:
vpd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.33 3-isopropylmalate dehydratase
VAPA_1c08590 (leuC1)
4.2.1.35 (R)-2-methylmalate dehydratase
VAPA_1c08590 (leuC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aconitase
AcnX
Motif
Other DBs
NCBI-ProteinID:
AGU47979
UniProt:
T1X6L7
LinkDB
All DBs
Position
1:948786..950072
Genome browser
AA seq
428 aa
AA seq
DB search
MTSNAPDRAPAQTLAQKLIARASGRAQVAVGEIVTCGVDMAMFHDSSGPRRLQPMLEELG
AQIWDRSRVVLVMDHYVPERDDDSRRIVRIARDWARDQQLPHVYDSQGICHVVVPQHGHI
RPGMLCVGGDSHSPTGGAFGAYMFGIGSTEMLGVMVTGEIWLRVPETIRMWWDGALPAGV
TAKDMMLHMVGRFGMNGGRYQAVEFAGPAVTALSMQERMTLSNMSAELGAQAGLIAPDAT
TAAFLAQAGAPQVDMAPWFTDEGTVLTHHCFDAATLEPYVAAPHSPANAHGVSRYLGTHV
DVAYIGACTGAKLDDLRAAAQVLRGHKVAAGIRLIVAPASLHDQERAREEGVLQVLMDAG
AELFPTACGACSGYGDPMGDDITVISTTARNFKGRMGSPTAQVYLGSPYTVAAAALRGCV
TDPREVLA
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgacctccaacgctccagaccgcgcgccggcgcagacgctggcgcagaagctcatcgcg
cgcgccagcggccgcgcgcaggtggcggtgggcgagatcgtgacctgcggcgtcgacatg
gccatgttccacgactcctccggtccgcgccggctgcagccgatgctcgaggagctcggc
gcgcagatctgggaccgctcccgcgtggtgctcgtcatggaccactacgtgcccgagcgt
gacgacgactcgcgccgcatcgtgcgcattgcgcgcgactgggcgcgcgaccagcagctg
ccacacgtgtacgacagccagggcatctgccacgtggtggtgccgcagcacggccacatc
cgccccggcatgctgtgcgtgggtggcgattcgcattcgcccacgggcggcgcattcggc
gcctacatgttcggcatcggcagcaccgagatgctgggcgtgatggtcaccggcgagatc
tggctgcgcgtgccggaaaccatccgcatgtggtgggacggcgcgctgcccgccggcgtg
accgccaaggacatgatgcttcacatggtcggccgcttcggcatgaacggcgggcgctac
caggcggtggagttcgccggcccggccgtcaccgcgctgtcgatgcaggagcgcatgacg
ctctccaacatgagcgccgagctgggtgcgcaggccggcctgatcgcacccgacgccacc
accgccgcgttcctcgcacaagccggcgccccgcaggtcgacatggcaccctggttcacc
gacgaaggcaccgtgctcacgcaccactgcttcgacgccgccacgctcgagccctacgtc
gccgcgccgcacagcccggccaacgcgcacggcgtgagccggtacctgggcacgcatgtc
gacgtggcctacatcggcgcctgcaccggcgccaagctcgacgacctgcgcgccgcggcc
caggtgctgcgcggccacaaggtggcggcgggcatccgcctgatcgtggcgccggccagc
ctgcacgaccaggagcgggcgcgcgaagagggcgtgctgcaggtgctgatggacgccggc
gccgaactcttcccgaccgcctgcggcgcctgctcgggctacggcgatccgatgggcgac
gacatcacggtgatctcgaccacggcacgcaacttcaagggccgcatgggctcgccgacc
gcgcaggtgtacctgggctcgccctacacggtggcggcggccgcactgcgcggctgcgtg
accgacccgcgcgaggtgctcgcatga
DBGET
integrated database retrieval system