Variovorax paradoxus B4: VAPA_1c28470
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Entry
VAPA_1c28470 CDS
T02835
Name
(GenBank) ABC transporter, ATP-binding protein
KO
K06158
ATP-binding cassette, subfamily F, member 3
Organism
vpd
Variovorax paradoxus B4
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
vpd03012
]
VAPA_1c28470
Translation factors [BR:
vpd03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
VAPA_1c28470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
ABC_tran_CTD
AAA_29
ATP-synt_ab
AAA_23
MeaB
MMR_HSR1
AAA_18
RsgA_GTPase
NACHT
AAA_16
RNA_helicase
AAA
DUF87
NAD1
DUF4349
Motif
Other DBs
NCBI-ProteinID:
AGU49943
UniProt:
T1XBL1
LinkDB
All DBs
Position
1:3013564..3015576
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AA seq
670 aa
AA seq
DB search
MITLKNVILRRSAKVLLDGATVTINPGEKVGLVGRNGAGKSTLFALFNGSLHEDGGDFYV
PKQWRMAQVAQDMPETEESATDFVVGGDTRLAELRTTLATIEAAYEANPDDADIGMELAH
AYTDLADAGEHDAVPRAQALILGLGFKSHELDGPVNSFSGGWRMRLQLARALMCPSDLLL
LDEPTNHLDLDALVWLEAWLQKYAGTMIVISHDREFLDAVTDVTLHIANAQLTRYGGNYS
KFEEMRALQMEQQQVAFSKQQDKIAHLQKFIDRFKAKASKAKQAQSRVKALERMEKVAPL
LAEADFTFEFKEPGNIPNPMLSISNASFGYEIEGEEPKTILRGVSRSVLAGQRIGILGAN
GQGKSTLVKTIAREMGALAGQVTEGKGLNIGYFAQQELDVLRPQDNPLEHMVRMARELGS
AVKESTGEQALRGFLGSFNFSGDMVKQPVGTMSGGEKARLVLAMMVWQRPNLLLLDEPTN
HLDLATREALAVALNEFEGTLMLVSHDRALLRSVCDEFWLVGRGVVTDFDGDLDDYQRYL
LDEAKRLREEAKVAVREAANTAVPVAAAPAPAANEPAAANKNPQQRKQDAQDRQQRSDQA
KPIKREIAQIDERLAAASAERTALEARLAQPLPPAEIAEAGKRLKALNDEIGRLEERWLA
LSGQLETLAA
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgattactctcaaaaacgtcattcttcgccgcagcgccaaggtcctgctcgacggcgcc
accgtcaccatcaaccccggtgaaaaggtcggcctcgtggggcgcaacggcgccggcaag
tcgaccctgttcgcgctcttcaacggctcgctgcacgaagacggcggcgacttctacgtg
cccaagcaatggcgcatggcacaggtcgcgcaggacatgcccgaaaccgaggagtcggcc
accgacttcgtggtgggcggcgatacccgcctggccgagctgcgcaccacgctggcaacc
atcgaggccgcctacgaagccaatcccgacgacgccgacatcggcatggaactggcccac
gcctacaccgacctggccgacgccggcgagcacgatgccgtgccgcgcgcgcaggccctg
atcctgggtctgggtttcaagtcgcacgagctcgacggccccgtcaacagcttctcgggc
ggctggcgcatgcgcctgcagctggcccgcgcgctgatgtgcccgagcgacctgctgctg
ctcgacgaacccaccaaccacctggatctggacgcgctggtgtggctcgaagcctggctg
cagaagtacgccgggaccatgatcgtcatcagccacgaccgcgagtttctcgacgccgta
accgacgtcaccctgcacatcgccaacgcccagctcacgcgctacggcggcaactacagc
aagttcgaggaaatgcgcgccctgcagatggagcagcagcaggtggccttctccaagcag
caggacaagatcgcccacctccagaagttcatcgaccgcttcaaggccaaggccagcaag
gccaagcaggcgcaaagccgcgtgaaggcactggagcgcatggagaaggtcgcgccgctg
ctggccgaggccgacttcaccttcgaattcaaggagcccggcaacatccccaacccgatg
ctctcgatcagcaacgccagcttcggttacgagatcgaaggcgaagagcccaagaccatc
ctgcgcggcgtcagccgctcggtgctggcgggccagcgcatcggcatcctgggcgccaac
ggccagggcaagtcgacgctggtgaagaccatcgcgcgcgaaatgggcgcactggccggc
caggtcaccgagggcaagggcctcaacatcggctacttcgcacagcaggaactcgacgtg
ctgcgcccgcaggacaacccgctcgagcacatggtgcgcatggcacgcgagctgggcagc
gccgtcaaggaaagcaccggcgaacaggccttgcgcggcttcctcggcagcttcaacttc
agcggcgacatggtgaagcagcccgtcggcacgatgagcggcggcgagaaggcgcgcctg
gtgcttgcgatgatggtgtggcagcgacccaacctgctgctgctggacgagcccaccaac
cacctggacctcgccacgcgcgaggccctggccgtggccctcaacgaattcgaaggcacg
ctgatgctggtgagccacgaccgcgcgctgctgcgctcggtgtgcgacgagttctggctc
gtgggccgcggcgtggtcaccgatttcgatggcgacctcgacgactaccagcgctacctg
ctcgacgaagccaagcggctgcgcgaagaagccaaggtggccgtgcgcgaagccgccaat
acggccgtccccgtggccgccgcgccagcgcctgccgccaacgaacctgcggccgcaaac
aagaacccgcagcagcgcaagcaggacgcccaggaccgccagcaacgcagcgaccaggcc
aagccgatcaagcgcgagatcgcgcagatcgatgaacgactggccgcggccagcgccgaa
cgcaccgcgctcgaggcgcgcctggcacagcccctgccgccggccgaaattgccgaagcg
ggcaagcggctgaaagccctcaacgacgaaatcggtcggctcgaagagcgctggctggcc
ctgtcgggccagctcgagacgctggcggcctga
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