Variovorax paradoxus B4: VAPA_1c32150
Help
Entry
VAPA_1c32150 CDS
T02835
Name
(GenBank) Hep/Hag repeat-containing protein
KO
K21449
trimeric autotransporter adhesin
Organism
vpd
Variovorax paradoxus B4
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpd02000
]
VAPA_1c32150
Transporters [BR:
vpd02000
]
Other transporters
Pores ion channels [TC:
1
]
VAPA_1c32150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YadA_head
Motif
Other DBs
NCBI-ProteinID:
AGU50302
UniProt:
T1XBJ5
LinkDB
All DBs
Position
1:complement(3390532..3392241)
Genome browser
AA seq
569 aa
AA seq
DB search
MKHRNKRTARGTALLGLAVAIGSAAGMASAQPVAWDPVKGNLGIGDNAGTTGVTGSNNQA
IGKNAGNNVSTQWNLGIGEAAGTNVSGGNANTAIGFNAGQNVAGGWNQAFGRSAGQNVTG
NYNNATGFWAGTGVTGSYNSAYGASAGRTVTGSNNQAFGQGAGNNVSTNWNLAIGEGAGS
NVSGKNANQAIGYYAGTNVVGGWNQSMGRSAGQNVTGDYNNAVGFWAGTDVTGTGNEAYG
SNAGRNVAGNGNQAYGGDAGRNVNGSNNLSTGQGAGARVTGSGNQASGLMAGAQVEGNNN
VAMGQAAGGGVQGSQNVALGAASGQGVVGSNNIAQGSGAGQNVSGNGNIAIGTEAGVYVS
ASQAISLGTSARASADNAVAIGSNATASHANSVALGSGSVTTRGAQSNYVAVGMAGLQSS
AGEVALGNRQLTGVAPGSAPTDATNVGQVQGMVQTGVASANAYTDTVAAQGLPFGKAYTD
LTAVRLQNQMDENARRAYAGIAGVAAMEAAPVVPGKTSYAVGLGNFRSESAMGGSIRRTS
EDGRYSVTLGVGATSSGVVSRVAFTGVFD
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
gtgaagcacaggaacaagcgcacggcgcgcggcacggcgctgctcgggctggccgtggcg
atcggctcggccgcgggcatggcgtcggcccagccggtcgcctgggacccggtcaagggc
aatctcggcatcggcgacaacgccggcacgaccggcgtcacgggcagcaacaaccaggcg
atcggcaagaacgccggcaacaacgtctcgacccagtggaacctgggcatcggcgaggcc
gccggcaccaacgtgagcggcggcaacgccaacacggccatcggcttcaacgcgggccag
aacgtggcgggaggatggaaccaggccttcggccgcagcgcgggccagaacgtcaccggc
aactacaacaacgccaccggcttctgggccggcaccggcgtgaccggctcgtacaacagc
gcctatggcgcaagcgcgggccgcaccgtgacgggcagcaacaaccaggctttcgggcag
ggcgcaggcaacaacgtcagcaccaactggaatctcgcgataggcgagggagcgggctcc
aacgtgtcgggcaagaacgccaaccaggccatcggctactacgcgggtaccaacgtggtt
ggcggctggaaccagtcgatgggccgcagcgcgggccagaacgtgaccggcgactacaac
aacgcggtcggcttctgggccggcaccgacgtgacgggcaccggcaacgaggcctacggc
agcaacgccgggcgcaacgtggccggcaacggcaatcaggcctacggcggcgacgcgggc
cggaacgtgaacggcagcaacaacctctccacggggcagggcgcgggtgccagggtgacc
ggctcgggcaaccaggcctcgggcctgatggccggtgcgcaggtcgagggcaacaacaac
gtggcgatggggcaggccgcgggcggcggggtgcagggcagccagaacgtggcgctcggc
gcggcctcgggccagggcgtggtgggcagcaacaacatcgcgcagggcagcggtgcgggc
cagaacgtctccggcaacggcaacatcgcgatcggcaccgaggccggtgtgtacgtgagt
gcgagccaggccatctcgctcggcacgtccgcgcgcgccagtgccgacaatgccgtggcg
atcggcagcaacgcgacggcctcgcatgcgaacagcgtggcgctgggctcgggcagcgtg
accacgcgcggcgcgcagtcgaactacgtggccgtgggcatggcgggcctgcagtcgtcg
gccggcgaagtggcgctgggcaaccgccagctcaccggcgtggcgcccggcagcgcgccg
accgacgcgaccaacgtgggccaggtgcagggcatggtgcagacgggcgttgcatcggcc
aacgcgtacaccgacaccgtcgcggcgcagggcctgccgttcggcaaggcctacaccgac
ctgacggccgtgcgcctgcagaaccagatggacgagaacgcgcggcgcgcctacgcgggc
atcgccggtgttgccgcgatggaggccgcgccggtcgtgcccggcaagaccagctacgcc
gtgggcctgggcaacttccgcagcgagagcgcgatgggcggctcgatccgccgcacgtcg
gaggacggccgctacagcgtcacgctcggcgtgggcgcgaccagttcgggcgtggtgagc
cgggtggcgttcacgggtgtgttcgactga
DBGET
integrated database retrieval system
