Variovorax paradoxus B4: VAPA_1c33500
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Entry
VAPA_1c33500 CDS
T02835
Symbol
tag
Name
(GenBank) DNA-3-methyladenine glycosylase 1
KO
K01246
DNA-3-methyladenine glycosylase I [EC:
3.2.2.20
]
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
VAPA_1c33500 (tag)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vpd03400
]
VAPA_1c33500 (tag)
Enzymes [BR:
vpd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.20 DNA-3-methyladenine glycosylase I
VAPA_1c33500 (tag)
DNA repair and recombination proteins [BR:
vpd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
VAPA_1c33500 (tag)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adenine_glyco
Motif
Other DBs
NCBI-ProteinID:
AGU50436
UniProt:
T1XD65
LinkDB
All DBs
Position
1:3538737..3539312
Genome browser
AA seq
191 aa
AA seq
DB search
MTPETKPRCTWARSDPLLASYHDAEWGVPERDSRALWEKLMLDGFQAGLSWLTILRKRDA
FRASFQGFVPEKVARFTAADVDRLMLDAGIVRSRAKIEATIGNARAYLAMQAAGEDFSAF
VWGMAGGKPIVNRTGTVPAKTPLSEEMSAALKKRGFKFVGPVIVYAWMQATGIVDDHAPD
CFCHHAAPQQR
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
atgacccccgagacaaagccccgctgcacctgggcccggagcgatccgctgctggcctcc
taccacgacgccgaatggggcgtgcccgagcgcgacagccgcgcgctgtgggaaaagctc
atgctcgacggctttcaggccggcctttcgtggctcacgatcctgcgcaagcgcgatgcg
ttccgcgcgtcattccagggcttcgtgcccgaaaaagtggcgcggttcaccgcagcggat
gtcgatcggctgatgctggacgcgggcatcgtgcgctcgcgcgccaagatcgaggccacc
atcggcaacgcccgtgcctaccttgcgatgcaggccgcgggcgaagatttttcggcgttc
gtctggggcatggccggcggcaagcccatcgtcaacaggacgggcacggtgccggcgaag
acgccgctttcggaagagatgtcggcagccctgaagaagcgcggcttcaagttcgtggga
ccggtgatcgtgtacgcgtggatgcaggccaccggcatcgtggacgaccacgcgcccgac
tgcttctgccaccacgccgcgccgcagcagcgctga
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