Variovorax paradoxus B4: VAPA_1c42550
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Entry
VAPA_1c42550 CDS
T02835
Symbol
secB
Name
(GenBank) protein-export protein SecB
KO
K03071
preprotein translocase subunit SecB
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd02024
Quorum sensing
vpd03060
Protein export
vpd03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
VAPA_1c42550 (secB)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
VAPA_1c42550 (secB)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VAPA_1c42550 (secB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
vpd03110
]
VAPA_1c42550 (secB)
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
vpd02044
]
VAPA_1c42550 (secB)
Chaperones and folding catalysts [BR:
vpd03110
]
Other chaperones and cochaperones
SecB
VAPA_1c42550 (secB)
Secretion system [BR:
vpd02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
VAPA_1c42550 (secB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecB
Motif
Other DBs
NCBI-ProteinID:
AGU51331
UniProt:
T1XFN3
LinkDB
All DBs
Position
1:complement(4517692..4518156)
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AA seq
154 aa
AA seq
DB search
MADQQAQDPVFQIQRVYLKDLSLEQPNSPAILLEQEQPTVDIQLGVDAQPVAEGIFEITV
SATVQTKIQDKTVFLVEAKQAGIFEIRNLPEDQMGPILGIACPQIVYPYLRGNVADVIQR
GGFPPVHLAEINFQAMYEQQQAQAAGQPSPIVTQ
NT seq
465 nt
NT seq
+upstream
nt +downstream
nt
atggccgaccagcaagcccaagatcccgttttccagatccagcgcgtctacctcaaggac
ctgtcgctcgaacagcccaattcgccggccatcctgctcgagcaggagcagcccacggtc
gacatccagctcggcgtggacgcccagccggtggccgaaggcatcttcgagatcaccgtg
tcggccaccgtgcagaccaagatccaggacaagaccgtgttcctggtcgaagccaagcag
gccggcatcttcgagatccgcaacctgcccgaagaccagatgggaccgatcctgggcatc
gcctgcccgcagatcgtctatccgtacctgcgcggcaacgtggccgacgtgatccagcgc
ggcggtttcccgcccgtgcacctggcggaaatcaacttccaggcgatgtacgagcagcag
caggcgcaggccgccggccagccctcgccgatcgtcacgcagtaa
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