Variovorax paradoxus B4: VAPA_1c53090
Help
Entry
VAPA_1c53090 CDS
T02835
Symbol
secF
Name
(GenBank) protein translocase subunit SecF
KO
K03074
preprotein translocase subunit SecF
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd03060
Protein export
vpd03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
VAPA_1c53090 (secF)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
VAPA_1c53090 (secF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
vpd02044
]
VAPA_1c53090 (secF)
Secretion system [BR:
vpd02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
VAPA_1c53090 (secF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF
Sec_GG
DUF4231
DUF5942
Motif
Other DBs
NCBI-ProteinID:
AGU52361
UniProt:
T1XIJ2
LinkDB
All DBs
Position
1:complement(5575570..5576526)
Genome browser
AA seq
318 aa
AA seq
DB search
MEFFRIHKTIPFMRHALVLNIVSFVTFALAVFFLLHRGLHLSVEFTGGTVMEVAYQQSAD
IGKVREAIGKLGYPDVQVQSYGTSRDVQIRLPAQKGMNSDQQSAQVMQALKTVDPSATQR
GIEVVGPQVGEELTTNGLKALGMVVVGIMIYLAIRFEWKFAVATVLANLHDVVIILGFFA
FFQWEFSLAVLAAVLAVLGYSVNESVVIFDRVRENFRRYRKMSTVEIIDNAITSTISRTI
ITHGSTQLVVLSMFFFGGPTLHYFALALTIGILFGIYSSAFVAAAIAMWLGVKREDLVKG
PTKRDGGSEDDPNAGAVV
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggaattcttccgcatccacaagaccatcccgttcatgcgccacgcgctggtgctgaac
atcgtctccttcgtcaccttcgcgctggcggtgttcttcctgctgcaccgcgggctgcac
ctgtcggtggagttcacgggcggcaccgtgatggaggtggcctaccagcagtccgccgac
atcggcaaggtgcgcgaggccatcggcaagctcggctatcccgacgtgcaggtgcaaagc
tacggcacctcgcgcgacgtgcagatccgcctgccggcgcaaaagggcatgaactccgac
cagcagagcgcgcaggtgatgcaggcgctcaagacggtcgatccgtcggccacgcagcgc
ggcatcgaggtcgtcggcccgcaggtcggcgaggagctcaccaccaacgggctcaaggcg
ctcggcatggtggtggtcggcatcatgatctacctggcgatccgcttcgaatggaagttt
gcggtggccaccgtgctggccaacctgcacgacgtggtcatcatcctcgggttcttcgcc
ttcttccagtgggagttctcgctcgcggtgctggcggcggtgctggcggtgctgggctat
tcggtcaacgagtcggtcgtgatcttcgaccgggtgcgcgagaatttccggcgctaccgc
aagatgagcacggtcgagatcatcgacaacgcgatcacctcgaccatcagccgcaccatc
atcacgcacggctcgacgcagctggtggtgctctcgatgttcttcttcggcggcccgacg
ctgcactactttgcgctggcgctgaccatcggcatcctgttcggcatctattcgtcggcc
ttcgtggcggcggccatcgcgatgtggctgggcgtcaagcgcgaggacctcgtcaagggc
ccgaccaagcgagacggcggctccgaagacgacccgaacgccggcgccgtggtctga
DBGET
integrated database retrieval system
