Variovorax paradoxus B4: VAPA_1c53420
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Entry
VAPA_1c53420 CDS
T02835
Name
(GenBank) hypothetical protein
KO
K07093
uncharacterized protein
Organism
vpd
Variovorax paradoxus B4
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99997 Function unknown
VAPA_1c53420
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PhoX
Mannosyl_trans3
Motif
Other DBs
NCBI-ProteinID:
AGU52394
UniProt:
T1XJ84
LinkDB
All DBs
Position
1:complement(5611928..5614177)
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AA seq
749 aa
AA seq
DB search
MSDRIDFNDEDSNRSANPTFDSVLTSRLNRRGLLLGGVGSAVLTACGGGSGGGVAFPIIP
PAPAPAPAPAPGPAPGPTEKLLGFGAVSKSLADSVLIPAGYSASVLYALGDPLTGATPAY
ANDGTDTGFENRGGDHHDGMEWFGLGADGKRSDSSIDRGLLAVNHEATTDETLSSFFLHA
NGGTTTLPRPAAEVDKETAVHGIAVLEVRKDGAGKWSYIQDSAFNRRVTPLTEIDIAGPA
KGDALMKTKYSPTGVKTRGTLNNCGTGKTPWGTFLTGEENWFGYFTRAAGDDAARGNDKS
VTSLKRYGRNAGATSRHGWETGGADDKYQRWNISKTGASVDGTDDYRNEMNGMGFVVEFD
PYNKSKLGVKRTALGRYAHESIAFSKPVAGQKVACYMGDDARNEYFYKFVSDAVWSEADA
NPADPLATGAKYLDQGTLYVARFDADGAGTWLELSLSNPAVAGFAGYSFANLADVVVNAR
LAADAAGATKMDRPEWCATNPANGEVYLTLTNNSNRRIEPASSSQLAPDPANPRVYTDFK
GATAQSGNPNGHILRMADAGGNPASTSFRWDVYAFGAESGANADTVNLSKLTADQDFSSP
DGLVFSRSTGICWIQTDDGAYTDVTNCMMLAALPGQVGDGAKKTLTYQRADSTQYTVDTM
IGKQPTADTLKRFLVGPSSCELTGLCETPDGKAIFVNIQHPGESTKQADLTDPSKYTSQW
PSNAGYGAGKRPRSATIVITKDDGGRIGS
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaccgcattgatttcaacgacgaagactccaaccgatccgccaatcccacattc
gacagcgtgctgaccagccggctcaaccggcgcggcctgctgctgggcggcgtcggctct
gccgtgctgactgcctgcggcggcggcagtggcggcggcgtggcattccccatcattccc
ccggcacctgcgccggcacctgcaccagcccccggacctgcgcccggaccgaccgagaaa
ctcctgggcttcggcgccgtatccaagagcctggccgacagcgtgctcattcccgccggc
tacagcgccagtgtcttgtatgccctgggcgatcccttgaccggcgccacgccggcctat
gccaacgacggcaccgacaccggcttcgagaaccgcggcggcgaccaccacgacggcatg
gagtggttcggcctgggcgccgacggcaagcgctccgactcgagcatcgatcgcggcctg
ctcgcggtgaaccatgaggcaaccaccgacgaaacgctttcctcgttcttcctgcacgcc
aacggcggcaccaccacactgcctcgcccggcagcggaagtggacaaggaaactgccgtt
cacggcatcgcggtcctcgaagtgcgcaaggacggcgccggcaaatggagctacatccag
gattcggccttcaaccgccgcgtcacgcccttgaccgagatcgacatcgccggccccgcg
aagggcgacgcgctgatgaagaccaagtactcgcccacaggcgtgaagacgcgcggcacg
ctcaacaactgcggcaccggcaagacgccgtggggcaccttcctcaccggcgaggagaac
tggttcggctacttcacccgcgccgcaggcgacgatgccgcgcgcggcaacgataagagc
gtgacctcgctcaagcgctacggccgcaacgccggcgcgaccagccgccacggctgggaa
accggcggcgctgacgacaagtaccagcgctggaacatcagcaagaccggtgcttccgtc
gacggcacggatgactaccgcaacgagatgaacggcatgggcttcgtcgtcgagttcgac
ccgtacaacaagtcgaagctgggcgtcaagcgcaccgcactgggccgctatgcgcacgag
agcatcgccttcagcaagccggtcgcgggccagaaggtggcctgctacatgggcgacgat
gcgcgcaacgagtacttctacaagttcgtttccgacgcggtctggtccgaggccgatgcc
aacccggccgatccgctcgccaccggcgccaagtacctcgaccagggcacgctctacgtg
gcgcgcttcgatgccgacggcgcgggcacctggctggagctgtcgctgtcgaacccggcg
gtggcgggctttgccggctattcgtttgcgaacctggccgacgtggtggtcaacgcgcgc
ctcgccgccgacgccgcgggcgccaccaagatggaccgccccgagtggtgcgccaccaac
ccggccaacggcgaggtctacctcacgctgaccaacaatagcaaccggcgcatcgagccg
gcctcgtcctcgcagctggcccccgatccggccaatccgcgtgtctacaccgacttcaag
ggcgcgacggcgcaatccggcaatccgaacggccacatcctgcgcatggccgatgctggc
ggcaatccggcgagcaccagcttccgctgggacgtctacgccttcggcgccgagtcgggc
gccaatgccgacacggtcaatctctcgaagctcacagccgaccaggacttctccagcccc
gacggcctggtgttcagccgctcgaccggcatctgctggatccagaccgacgacggcgcc
tacaccgacgtgaccaactgcatgatgctggccgcgctgccgggccaggtcggcgacggc
gccaagaagacgctgacctaccagcgcgcggacagcacgcagtacacggtcgacaccatg
atcggcaagcagccgacggcggacacgctcaagcgcttcctggtaggcccttcgagctgc
gagctcaccggcctctgcgaaacgccggacggcaaggcgatcttcgtcaacatccagcac
ccgggcgaaagcaccaagcaagccgacctgacggatccctcgaagtacaccagccagtgg
ccttccaatgcgggctatggtgcaggcaagcgcccgcgctcggcaaccatcgtcatcacc
aaggatgacggcggacgcatcggcagctga
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