Variovorax paradoxus B4: VAPA_2c10000
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Entry
VAPA_2c10000 CDS
T02835
Name
(GenBank) DNA-3-methyladenine glycosylase
KO
K01246
DNA-3-methyladenine glycosylase I [EC:
3.2.2.20
]
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
VAPA_2c10000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vpd03400
]
VAPA_2c10000
Enzymes [BR:
vpd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.20 DNA-3-methyladenine glycosylase I
VAPA_2c10000
DNA repair and recombination proteins [BR:
vpd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
VAPA_2c10000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adenine_glyco
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
AGU53556
UniProt:
T1XLY2
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All DBs
Position
2:1027884..1028495
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AA seq
203 aa
AA seq
DB search
MGSTLLGPDGQPRCRWCAAAPEFLHYHDTEWGFPVTDDHRLFEKLCLEGFQSGLSWRTIL
VKRENFRTAFLGFDYRRVARLGERDVERLLGDSGIVRHRGKIEAVVHNARMAEEMAQREG
SLASYFWRHEPNPAQLAEPQTASASAVSQALSKDLKKQGWKFVGPTTVYAFMQAVGLIND
HAAGCVTRARVEQARRALALSIP
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atgggctcgactctcctcgggcccgatgggcagccgcgctgtcgctggtgcgccgccgct
cccgagtttctccattatcacgatactgaatggggcttcccggtcacggatgaccaccgc
ctcttcgagaagctgtgcctggaaggcttccagtcgggcctgagctggcgcaccattctg
gtcaagcgagagaacttccggacagccttcctgggcttcgactaccggcgtgtcgcgcgc
ttgggcgaacgcgatgtcgagcgattgctcggcgacagcggcatcgtgcgccatcgcggc
aagatcgaggccgtggttcacaacgcgcgcatggccgaggagatggcgcagcgcgaggga
tcgctggcgtcttacttctggcgccacgagccgaaccctgcgcagctcgcagagccgcaa
accgcttctgcgtcagcggtctcgcaggccttgtccaaggacttgaagaaacagggctgg
aagtttgtcgggcccaccactgtgtatgccttcatgcaggccgtggggctgatcaatgac
catgctgccggctgcgtgacacgcgcccgggtcgaacaggcgcgccgggcgcttgcattg
tcgatcccctga
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