Variovorax paradoxus EPS: Varpa_0778
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Entry
Varpa_0778 CDS
T01392
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe00521
Streptomycin biosynthesis
vpe00523
Polyketide sugar unit biosynthesis
vpe00541
O-Antigen nucleotide sugar biosynthesis
vpe01100
Metabolic pathways
vpe01110
Biosynthesis of secondary metabolites
vpe01250
Biosynthesis of nucleotide sugars
Module
vpe_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
Varpa_0778
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
Varpa_0778
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
Varpa_0778
Enzymes [BR:
vpe01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
Varpa_0778
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GFIT
Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
ADU34996
UniProt:
E6V8L3
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All DBs
Position
877300..877854
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AA seq
184 aa
AA seq
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MKISPTIIPDVLILEPKVFGDARGFFLESYNEEVFRRATGSDLAFKQDNHSRSSKGVLRG
LHYQVKQPQGKLVRVVQGAVFDVAVDIRPTSPTFGKWVGVELNESNHRQLWVPPGLAHGF
LVLSETADFLYKTTDYYAPAHERSIAWNDPAIGIDWPLSGASPVLSAKDAAAPTLAESIA
GDGP
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atgaagatttctcccaccatcattccggacgtcttgatcctggagcccaaggtcttcggt
gacgcccgaggtttcttcctcgaaagctacaacgaagaagttttccgccgtgccacgggc
tcggacctggcgttcaagcaagacaaccactcacgttcgtccaagggcgtgctgcgtggc
ttgcactatcaggtcaagcagccgcaaggaaagctggtgcgcgtggttcagggcgcggtg
ttcgacgttgcagtggacatccggccaacctccccgactttcgggaaatgggtgggcgtg
gagctcaacgaaagcaatcatcgacaactctgggtgccgcccggcctggcgcacggcttt
ctcgtattgagcgagacggcagactttctctacaagaccaccgactactacgcgcccgcc
catgagcggagcatcgcgtggaacgacccggcgatcgggatcgattggcccctttcgggc
gcctcgccggtgctgtccgccaaggacgccgcggcaccaacgcttgccgaaagcatcgcc
ggagatggcccttga
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