Variovorax paradoxus EPS: Varpa_4415
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Entry
Varpa_4415 CDS
T01392
Name
(GenBank) ribonuclease H
KO
K03469
ribonuclease HI [EC:
3.1.26.4
]
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Varpa_4415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vpe03032
]
Varpa_4415
Enzymes [BR:
vpe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
Varpa_4415
DNA replication proteins [BR:
vpe03032
]
Eukaryotic type
DNA Replication Elongation Factors
RNase H
Varpa_4415
Prokaryotic type
Elongation factors (bacterial)
RNase H
Varpa_4415
Elongation factors (archaeal)
Varpa_4415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RVT_3
RNase_H
Motif
Other DBs
NCBI-ProteinID:
ADU38583
UniProt:
E6VAB1
LinkDB
All DBs
Position
complement(4790253..4790696)
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AA seq
147 aa
AA seq
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MHSRHWTVHCDGSAMPNPGRMGIGAVITQPDGTRHTLSQATHAIGCNNEAELRALTLALR
ELRARGASAVVAYSDNSILVEQLGTADARPIARLAPLYDDARALLGEFEEARVQWIPRHR
NAEADALARAALGMGPKPPPKPWKKRR
NT seq
444 nt
NT seq
+upstream
nt +downstream
nt
atgcattcgcgccactggaccgtccattgcgacggcagcgccatgcccaacccgggccgc
atgggcatcggcgcggtcatcacgcagcccgacggcacccgccacacgctctcgcaggcc
acgcacgccatcggctgcaacaacgaggcggagctgcgggcattgaccctggccttgagg
gagctgcgcgcccgcggcgccagcgccgtggtggcgtacagcgacaacagcatcctggtc
gagcagctcggcacggccgatgcccggccgatcgcgcggctggcaccgctctacgacgat
gcccgtgcgctgctgggcgagttcgaagaagcccgcgtgcaatggattccgcgccatcgc
aatgccgaggccgatgcgctggcgcgcgcggcccttggcatggggccgaagccgccgccc
aagccctggaaaaagcggcgctga
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