Variovorax paradoxus EPS: Varpa_4885
Help
Entry
Varpa_4885 CDS
T01392
Name
(GenBank) 3-isopropylmalate dehydratase, large subunit
KO
K01703
3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:
4.2.1.33
4.2.1.35
]
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe00290
Valine, leucine and isoleucine biosynthesis
vpe00660
C5-Branched dibasic acid metabolism
vpe01100
Metabolic pathways
vpe01110
Biosynthesis of secondary metabolites
vpe01210
2-Oxocarboxylic acid metabolism
vpe01230
Biosynthesis of amino acids
Module
vpe_M00432
Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00660 C5-Branched dibasic acid metabolism
Varpa_4885
09105 Amino acid metabolism
00290 Valine, leucine and isoleucine biosynthesis
Varpa_4885
Enzymes [BR:
vpe01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.33 3-isopropylmalate dehydratase
Varpa_4885
4.2.1.35 (R)-2-methylmalate dehydratase
Varpa_4885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aconitase
Motif
Other DBs
NCBI-ProteinID:
ADU39046
UniProt:
E6V123
LinkDB
All DBs
Position
complement(5303580..5304998)
Genome browser
AA seq
472 aa
AA seq
DB search
MSLAPRTLFDKIWQPHVVMQRDDGQSLLYVDRHLVQDGSAPAFEMLRQRGLPVRRPDRAF
ATPDHYVPTGSRALADIADPEKRAMAEALRDDSAAAGIRFFGLDDLRQGIVHVVGPEQGL
SLPGSVIVCGDSHTATHGALGALAFGIGASEVAHVLATQTLWQRKPRTLRVTIDGRLSDG
VSAKDIILAVIARLGAAGGTGHVIEYAGEAIRALSMAGRMTVCNMSIEAGARAGMVAPDD
TTFEWLAGRPEAPQGAAWDEAVARWRQLPSDEGAVFDTELRLSAGDIAPMVTWGNSPEDA
LPITGRVPDPAEAATAERRASMQRTLAYMGLEAGQMLDEVAVDRVFIGSCTNGRIEDMRS
AAEVVRGRRVAEGVEAWVVPGSGLVKQQAEAEGLDALFLAAGLQWRHAGCSMCLGTNGDQ
VAAGQRCASTSNRNFVGRQGPGSRTHLMSPAMAAAAAITGRLTDVRSLLAAH
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgtccctcgctccccgcaccctcttcgacaagatctggcagccgcacgtggtgatgcag
cgcgacgacggccagagcctgctgtacgtcgaccgccacctggtgcaggacggctccgcg
cccgccttcgagatgctgcgccagcgcggccttccggtgcgccgtccggaccgcgccttc
gccacgcccgaccactacgtgccgacaggttcgcgcgcgctcgccgacattgccgacccc
gagaagcgcgcgatggccgaggcgctgcgggacgacagcgcggccgcgggcatccgcttc
ttcggcctcgacgacctgcgccagggcatcgtgcacgtggtggggccggagcagggcctg
agcctgccgggcagcgtgatcgtctgcggcgacagccacaccgccacgcatggcgcgctc
ggtgcactggccttcggcatcggtgcctctgaagtggcgcacgtgctcgccacgcagacg
ctgtggcagcgcaagccccgcacgctgcgcgtgacgatcgatgggcgcttgtccgacggc
gtctcggccaaggacatcatcctcgcggtgatcgcgcggctcggcgccgcgggcggcacg
gggcacgtcatcgagtacgcgggcgaggcgatccgcgcgctctcgatggccgggcgcatg
acggtgtgcaacatgtcgatcgaggccggcgcgcgggcgggcatggtggcgcccgacgac
accaccttcgaatggctggccggccggcccgaggcgccgcagggtgccgcgtgggacgag
gcggtcgcgcgctggcgccagttgcccagcgacgagggcgcggtgttcgacaccgaactg
cgtctttccgccggcgacatcgcgccgatggtcacctggggcaacagccccgaggacgca
ctgccgatcaccggccgcgtgcccgacccggccgaagccgccaccgccgagcgccgcgca
tcgatgcagcgcacgctcgcctacatgggccttgaagcggggcagatgctcgacgaggtg
gcggtcgatcgcgtcttcatcggctcgtgcaccaacggccgcatcgaggacatgcgcagc
gccgccgaggtggtgcgcgggcggcgcgtggccgagggcgtcgaagcctgggtcgtgccc
ggctccggcctcgtgaagcagcaggccgaggccgaggggctcgatgccttgttcctggcg
gcgggcctgcagtggcgccatgccggctgctcgatgtgcctgggcaccaacggcgaccag
gtggccgcgggccagcgctgcgcctcgacctccaaccgcaacttcgtcggccgccagggg
ccgggttcgcgcacgcacctcatgagcccggcgatggccgcggccgccgccatcaccgga
cggctgaccgacgtgcgcagcctgctcgccgcgcactga
DBGET
integrated database retrieval system
