Variovorax paradoxus EPS: Varpa_4921
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Entry
Varpa_4921 CDS
T01392
Name
(GenBank) fibronectin type III domain protein
Organism
vpe
Variovorax paradoxus EPS
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_3
Alginate_lyase
Laminin_G_1
Laminin_G_2
Motif
Other DBs
NCBI-ProteinID:
ADU39081
UniProt:
E6V158
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Position
5340206..5342368
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AA seq
720 aa
AA seq
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MDSFDNENTAPLDRRIFCLSAISLATLGATACGGGSGGSGFVGGGIAAGPGVPTAVAPAP
PTAVDPSGDPSAPAVAPPPPSPPQARKFVHPGLLHTESDFERMRQKVQEQAQPWLSGWNA
LTGNGRAQLGAKPRPLATVIRGDVPGQNFAQFYIDVARAYQLALRWKVSQDTRYADLAVV
FLNEWSSTLKEVTGNADRFLAAGIYGYEFANAAEIMRTYPGWAPADFARFQTMMLDIFYP
LNNQFLTIHNGTQYSSYWANWDQCSMASILAIGVLCDRPDIYDEAISYYKAGQGNGAGLQ
AVYYVHPGYLGQWQESGRDQGHCTLGIGLAGAFCEMAWNQGDDIYGYENNRFLAGAEYVA
KTNLRDGTGAFYTMPYFTNVNKQGKQAELSTGAQGHRRGIWESVHNHYANRLGIATPYTA
LQAIQMRPEGDGGKGDELGFGTLTFTRDPLPTAGRPSGLTARLRGTQVVLSWWGCTGAQS
YSVRRAERAGGPYSVIASGITDTLTFNDTALSATGATGATDVYHYVIVAATASGDSAPST
EARVSVAPELLLQWKPDGGARTPVRLPTGLAKNAADFTVSVRVFLDSAATWARVFDFGSG
TRRYMMLTVRNGGGVVRYGISTVHGFNEEGIDGTSALATGRWVHVAVTLSGTLGTLYVDG
VVDGTNAQMTLTPADLGETTQNWLGHSQFAKDPDLQGRVDDLRFYSGALGATEIAALAKA
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggattcattcgacaacgaaaacaccgcgcccttggaccgtcgcatcttttgcctcagc
gcgatcagccttgccactctgggcgcgacagcttgcggtggtggtagtggaggcagcggc
tttgtcggcggtggcatcgctgcgggaccgggggtaccgactgcggtcgcgccggctcct
cccacagcagtcgatccttccggcgatccgagcgctcccgcggtggctccgccccctcct
tcaccccctcaggcacgcaagttcgtccaccccggccttcttcacacggagagcgatttc
gagcgcatgcgccagaaggtccaggagcaggcgcaaccgtggctctccggctggaatgca
ttgacaggcaacggccgcgcgcagctcggtgcgaagccgcgtccgctggccacggtgatt
cggggggacgtcccgggccagaacttcgcgcagttctacatcgacgtcgcgcgcgcctac
caactcgcgctgcgctggaaggtctcgcaggacacgcgctatgccgaccttgcggtggtc
ttcctgaacgaatggtcctccacgctcaaggaggtcacgggcaatgcggaccgctttctc
gcggcgggcatctacggctacgagttcgcgaacgcggccgagatcatgcgcacctaccca
ggctgggcgccggccgatttcgcgcgcttccagaccatgatgctggacatcttctatccg
ctcaacaaccagttcctcaccatccacaacggcacccagtacagcagctactgggccaac
tgggaccaatgcagcatggcctcgatcttggccatcggcgtgctctgcgaccggccggac
atctacgacgaggcgatcagctactacaaggccggccagggcaacggcgcgggcctgcag
gcggtctactacgtgcatcccggctacctcggccaatggcaggaaagcgggcgcgaccag
ggccactgcacgctgggcatcggccttgcgggcgccttctgcgagatggcgtggaaccag
ggcgacgacatctacggctacgagaacaaccgcttcctggcgggcgccgagtacgtggcg
aagaccaatcttcgcgatggcaccggcgccttctacacgatgccctacttcaccaacgtc
aacaagcaaggcaagcaggccgagctgtcgacgggagcccagggccatcggcgaggcatc
tgggaaagcgtgcacaaccactatgccaatcgcctgggcatcgcgacgccctacaccgcc
ctgcaagccatccagatgcgccccgagggagacggcggcaaaggcgacgaactgggcttc
ggcacgctgaccttcacgcgcgatccgctgccgacagccgggcgccccagcgggttgacc
gcgcgcttgcgcggcacgcaggttgtgctgtcatggtggggctgcaccggtgcgcagagc
tactcggtgcgccgcgcggagcgggccggcggcccctacagcgtgatcgcatcgggcatc
accgacacgctcacgttcaacgacaccgcgctcagcgcgaccggcgcgaccggcgcgacc
gacgtctaccactacgtgatcgtcgcggccaccgcctcgggcgacagcgcgccgtccacc
gaagcgcgggtgtccgtggcgcccgagctgctgctgcagtggaagcccgatggcggcgcg
cgcacgcctgtccgcctgccgacgggtcttgcgaagaacgccgccgacttcacggtctcg
gtccgggtcttcctggacagcgccgcaacgtgggcccgcgtgttcgacttcggctccggc
acgcgccgctacatgatgctcacggtccgcaatggcggcggtgtggtccgctacgggatc
tccacggtccacggcttcaacgaggaggggatcgacggcacgtcggcgcttgccaccgga
cgctgggtgcatgtcgcggtcaccctgtcgggcacgctcgggacgctgtacgtggacggc
gtcgtcgacggcaccaatgcacagatgacgctcacgcccgccgacctgggcgagacgacg
cagaactggctcggccattcgcagtttgccaaagaccccgatctgcagggacgcgtggac
gacctgcgcttctacagcggcgcactcggcgcgacagagattgccgcactggcgaaggcc
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