Variovorax paradoxus EPS: Varpa_5355
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Entry
Varpa_5355 CDS
T01392
Name
(GenBank) Carbamoyl-phosphate synthase L chain ATP-binding protein
KO
K01968
3-methylcrotonyl-CoA carboxylase alpha subunit [EC:
6.4.1.4
]
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe00280
Valine, leucine and isoleucine degradation
vpe01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
Varpa_5355
Enzymes [BR:
vpe01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.4 methylcrotonoyl-CoA carboxylase
Varpa_5355
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
ATP-grasp
Dala_Dala_lig_C
Biotin_lipoyl_2
HlyD_3
HlyD_D23
LAL_C2
GCV_H
RnfC_N
ATP-grasp_4
DUF3182
NQRA
ATP-grasp_3
DUF2118
Motif
Other DBs
NCBI-ProteinID:
ADU39511
UniProt:
E6V7E2
LinkDB
All DBs
Position
complement(5814567..5816567)
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AA seq
666 aa
AA seq
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MFKKILIANRGEIACRVAATARRMAIRTVAVYSDADAHANHVRACDESVHIGGSAPKESY
LRWERILEAAKATGAEAVHPGYGFLSENEEFAQACADAGLVFIGPPPSAIKAMGLKAESK
QLMEKAGVPLVPGYHGHDQDPALLQREADRIGYPVLIKASAGGGGKGMRAVDKAADFEAA
LASCKREAINSFGDDAVLIEKYVQRPRHIEIQVFGDTHGNYVYLFERDCSVQRRHQKVLE
EAPAPGMTEAMRKQMGDSAVAAARAVNYVGAGTVEFIVEQREGGEMNFFFMEMNTRLQVE
HPVTEAITGLDLVEWQLRVASGEVLPAKQADLQIHGHAIEARICAENPDNNFLPATGTLR
VYRKPQATAFQRSRVRIDDGVREGGEISPFYDSMIAKLIVHGSTRAEALARLDAALAQVQ
IVGVATNVQFLRGILATESFSKANLDTALIERERAVLFDREALGLPMAAAAAITRTLITE
WPAKMPDPFARRDGWRALGEYRRHFDFEFRGAEQTAVLTYKRDGGLWLEAGGTAGPLVIG
QFPTGEFEVEFGGSRQTLDVHLDGATAHVFAAKGATKITAIDRLAHAGDTQAEGGRLTAP
MPGKVVSFAVKAGDKVSRGQPLAVMEAMKMEHTIAAPADGTVEELMFSPGEQVAEGEELL
RMATAA
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgtttaagaaaatcctgatcgcgaatcgcggtgaaatcgcttgccgggtggcggctact
gcccgtcgcatggccatccgcacggtcgccgtgtattccgatgccgacgcgcatgccaac
cacgtgcgcgcctgcgacgagtcggtgcacatcgggggcagcgcccccaaggaaagctac
ctgcgctgggagcgaatcctcgaggccgccaaggccacgggcgccgaagcagtgcatccc
ggctacggcttcctgagcgagaacgaagagttcgcacaagcctgcgccgacgcggggctg
gtcttcatcggcccgccgccctcggcgatcaaggcgatgggcctgaaggccgagtcgaag
cagctgatggaaaaggccggcgtgccgctggtgcccggttaccacggccacgaccaggac
ccggcgctgctgcagcgcgaagccgaccgcatcggctacccggtgctcatcaaggcgagc
gcgggcggcggcggcaagggcatgcgcgcggtggacaaggccgcggatttcgaagcggcg
ctcgcctcgtgcaagcgcgaagccatcaacagcttcggcgacgacgcggtgctgatcgag
aagtacgtgcagcgcccgcgccatatcgagatccaagtgttcggcgacacgcacggcaac
tacgtctacctgttcgagcgcgactgctcggtgcagcgtcgccaccagaaggtgctcgaa
gaggcgcccgcgcccggcatgaccgaggcgatgcgcaagcaaatgggcgattcggccgtg
gcggctgcgcgtgccgtgaactacgtcggcgcgggcaccgtcgaattcatcgtcgagcag
cgtgaaggcggcgagatgaacttcttcttcatggagatgaacacgcgcctgcaggtggag
catcccgtgaccgaagcgatcaccggcctcgacctcgtcgaatggcaactgcgcgtggcc
tccggcgaggtgctgcccgccaagcaggcggacctgcagatccacggtcacgcgatcgaa
gcgcgcatctgcgccgagaaccccgacaacaacttcctgcccgccaccggcacgctgcgc
gtgtaccgaaagccccaggcgactgccttccagcgcagccgcgtgcgcatcgacgacggc
gtgcgcgagggcggtgagatttcgcccttctacgactcgatgatcgccaagctgatcgtg
cacggcagcacgcgcgccgaggcgctggcccggctcgacgcagcgctcgcacaggtgcag
atcgtgggcgtggcgacgaacgtgcagttcctgcgcggcatcctcgcgaccgaatcgttc
tcgaaagccaacctcgacaccgcgctgatcgagcgcgagcgcgccgttctgttcgaccgc
gaggcactgggcctgccgatggccgccgccgccgcgatcacgcgcacgctgatcaccgag
tggcccgcaaaaatgcccgatccctttgcgcgccgcgacggctggcgcgcattgggggaa
taccggcgccacttcgacttcgagttccgcggtgcggagcagacggccgtgctgacctac
aagcgcgacggcggcctctggctcgaagccggcggcacggccgggccgctggtcatcggc
cagttcccgacgggcgagttcgaggtcgagttcggcggctcgcgccagacgctcgacgtg
cacctggacggcgccacggctcatgtgttcgccgcaaagggcgccacgaagatcaccgcc
atcgaccgcctcgcccacgcgggcgacacgcaggctgaaggcggccggctcaccgcgccg
atgcccggcaaggtcgtgtctttcgccgtgaaggcgggcgacaaggtcagccgcggccag
ccgctggccgtgatggaagctatgaagatggagcacaccatcgcggcgccggccgacggt
acggtggaagaactgatgttctcgcccggcgagcaggtggccgagggtgaagagctgctg
cgaatggccaccgcggcctga
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