Variovorax paradoxus EPS: Varpa_5605
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Entry
Varpa_5605 CDS
T01392
Name
(GenBank) Porphobilinogen synthase
KO
K01698
porphobilinogen synthase [EC:
4.2.1.24
]
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe00860
Porphyrin metabolism
vpe01100
Metabolic pathways
vpe01110
Biosynthesis of secondary metabolites
vpe01120
Microbial metabolism in diverse environments
vpe01240
Biosynthesis of cofactors
Module
vpe_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
Varpa_5605
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vpe04147
]
Varpa_5605
Enzymes [BR:
vpe01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.24 porphobilinogen synthase
Varpa_5605
Exosome [BR:
vpe04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
Varpa_5605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ALAD
Motif
Other DBs
NCBI-ProteinID:
ADU39759
UniProt:
E6VBF9
LinkDB
All DBs
Position
6092216..6093229
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AA seq
337 aa
AA seq
DB search
MTRPHSPLAMFPAGRPRRLRRDAFTRNLVRENTLTVNDLIYPVFVQEGEKRLDAVSSMPG
VERLSLDLLLPIAEQCVAAGIPVMALFPVIDASLKTPAGDEAFNPDGLIPRVVAALKSRF
PELGVMTDVALDPYTSHGQDGLLDDNGYIVNDATVEVLVKQALTQSQAGVDIVAPSDMMD
GRIGAVRTALEARGDIHTRIMAYSAKYASAFYGPFRDAVGSAATLGKSNKKVYQMDPGNS
DEALREVALDIAEGADMVMVKPGMPYLDIVRRVKDEFHVPTFAYQVSGEYAMLKAAAQNG
WLDHDAVVLESLLAFKRAGADGVLTYFALDAARLLQS
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgccctcactccccccttgccatgttccccgccggccgtccaaggcgcctgcgc
cgggacgcctttacccgcaacctggtgcgcgagaacacgctgacggtcaacgacctgatc
tatccggtgttcgtgcaggaaggcgaaaagcggctcgatgccgtctcctccatgcccggc
gtggagcgcctgagtctcgacttgcttttgccgattgccgagcaatgcgtggcggcgggc
atcccggtgatggcgctgtttccggtgatcgacgcgagcctcaagacaccggccggcgac
gaagcgttcaaccccgacgggctgattccccgggtggtcgccgccctcaagtcgcgcttc
cccgaactcggcgtgatgactgacgtggcgctcgacccctacaccagccacgggcaggac
ggcctcctcgacgacaacggctacatcgtcaacgacgcaaccgtcgaagtgctggtgaag
caggcactcacacaatcgcaagctggcgtggacattgtggcgcccagcgacatgatggac
ggccgtatcggagccgtccgcaccgccctggaagcccgcggcgacattcacacgcgcatc
atggcctacagcgccaagtacgccagcgccttctacggccccttccgcgatgccgtcggc
tcggccgccacgctcggcaagagcaataaaaaggtctaccagatggacccgggcaacagc
gacgaagcgctacgcgaggtggctctggacatcgccgaaggcgccgatatggtgatggtc
aagcccggcatgccctacctggacatcgtgcgccgcgtgaaggatgagttccatgtgccg
accttcgcctaccaggtgagcggcgagtacgcgatgctcaaggccgccgcacagaacggc
tggctcgatcacgacgccgtcgtgctcgaaagcctgctggccttcaagcgggccggtgcc
gatggcgtgctcacgtactttgcccttgacgccgcgcgcctgctacaaagttaa
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