Vibrio parahaemolyticus UCM-V493: VPUCM_20082
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Entry
VPUCM_20082 CDS
T03116
Name
(GenBank) Oligogalacturonate lyase
KO
K01730
oligogalacturonide lyase [EC:
4.2.2.6
]
Organism
vph
Vibrio parahaemolyticus UCM-V493
Pathway
vph00040
Pentose and glucuronate interconversions
vph01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vph00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
VPUCM_20082
Enzymes [BR:
vph01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.6 oligogalacturonide lyase
VPUCM_20082
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Motif
Pfam:
Pectate_lyase22
PD40
Motif
Other DBs
NCBI-ProteinID:
AHJ01203
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Position
2:81293..82459
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AA seq
388 aa
AA seq
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MAKGDVITLNFETFVDSDTQVKVTRLTPTDVICHRNYFYQKCFTQDGKKLLFAGDFDGNR
NYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEEQVIYTV
DEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLVKVDIETGEL
EVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNENGSNVRKIKEHAEGESC
THEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMPPCSHLMSNFDGSLMVGD
GCDAPVDVADADSYNIENDPFLYVLNTKAKSAQKLCKHSTSWDVLDGDRQITHPHPSFTP
NDDGVLFTSDFEGVPAIYIADVPESYKH
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaggtgatgtgattactctcaacttcgaaacgtttgttgatagtgatacccaa
gtgaaagtgacgcgattaacgccaacggacgtgatttgtcaccgtaactacttttaccag
aagtgctttactcaggatggaaaaaagctgctgtttgcaggtgatttcgacggaaatcgc
aactattacctgcttaaccttgaaacgcaacaagcagtccaactgacggaaggtaaaggt
gacaacacctttggcggtttcatttcgacggatgagcgtgcatttttctacgtgaaaaac
gaactgaatttgatgaaagtcgatttagaaacgctggaagaacaagtcatttatacggtc
gatgaagagtggaaaggctacggtacttgggtggcaaattctgactgtaccaagttagtc
ggcatcgagattttaaaacgtgattggcaaccgctgacatcgtgggaaaagtttgccgag
ttctaccacactaatccaacttgtcgcctagttaaagtggatatcgaaaccggtgagctg
gaggtgatccatcaagacactgcgtggctaggtcacccgatttaccgtccgtttgatgac
tcaacggttggtttctgtcatgaaggtccgcatgatttggtggatgcgcgcatgtggctg
gtcaatgaaaatggcagcaacgttcgtaaaatcaaagagcacgcagaaggtgaatcgtgc
acgcacgagttctggattccagatggcagcgcaatggcgtacgtttcttacttcaaaggc
caaactgatcgcgtgatttacaaagccaacccagagacattagagaatgaagaagtgatg
gtgatgccaccttgttctcaccttatgagtaacttcgatggttctttgatggtcggtgat
ggttgcgatgcgccagttgatgttgcagacgcggacagctacaacatcgaaaatgacccg
ttcttgtatgtattgaacacaaaagcgaaatcggcgcaaaaactgtgtaagcacagcaca
tcttgggatgtattggatggcgatcgccaaattactcacccgcatccgtcattcacaccg
aacgatgatggcgtgttgtttaccagtgactttgaaggcgttcctgcgatttacattgcg
gacgtgccggagtcttacaagcactga
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