Vibrio parahaemolyticus UCM-V493: VPUCM_20318
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Entry
VPUCM_20318 CDS
T03116
Name
(GenBank) Redox-sensitive transcriptional activator SoxR
KO
K13639
MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
Organism
vph
Vibrio parahaemolyticus UCM-V493
Brite
KEGG Orthology (KO) [BR:
vph00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vph03000
]
VPUCM_20318
Transcription factors [BR:
vph03000
]
Prokaryotic type
Helix-turn-helix
MerR family
VPUCM_20318
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MerR-DNA-bind
MerR_1
MerR
HTH_17
Allexi_40kDa
NFRKB_winged
DUF1836
Ribosomal_L12
Chorismate_synt
TPR_MLP1_2
Motif
Other DBs
NCBI-ProteinID:
AHJ01439
LinkDB
All DBs
Position
2:325351..325788
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AA seq
145 aa
AA seq
DB search
MEISVGEVAKRSGVKVSALHFYEQKGLISSWRNQGNQRRYHRSVLRRVAVIKAAQQVGLS
LEEIKHALDELPKHQAPNKEQWEVMASHWHEQLEQKIQKLKALQNDLGGCIGCGCLSLET
CALRNPEDVLGKDHSGSNLTLEEGA
NT seq
438 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcagcgtaggagaagtggcaaaacgttctggagtgaaagtctctgccctgcat
ttttatgaacaaaaaggactgatttcgagttggagaaatcaaggcaatcagcgccgctac
caccgtagcgttttgcgccgtgtcgcggtgattaaagcggctcagcaagttgggttatcg
ttagaagaaattaaacatgcgctagatgagctgccgaaacatcaagctccgaacaaagag
caatgggaagtcatggcgagccattggcatgaacagttagaacaaaagattcaaaagctc
aaagccttgcaaaacgatttgggtggatgcattggctgcggatgtttgtcgttagaaacc
tgcgcactgcgaaacccagaagatgtgttaggcaaagatcactcaggttctaatttgacc
ttagaagaaggggcgtaa
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