Vibrio parahaemolyticus UCM-V493: VPUCM_20550
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Entry
VPUCM_20550 CDS
T03116
Name
(GenBank) Methylcrotonyl-CoA carboxylase biotin-containing subunit
KO
K01968
3-methylcrotonyl-CoA carboxylase alpha subunit [EC:
6.4.1.4
]
Organism
vph
Vibrio parahaemolyticus UCM-V493
Pathway
vph00280
Valine, leucine and isoleucine degradation
vph01100
Metabolic pathways
Module
vph_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
vph00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
VPUCM_20550
Enzymes [BR:
vph01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.4 methylcrotonoyl-CoA carboxylase
VPUCM_20550
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
Dala_Dala_lig_C
Biotin_lipoyl_2
ATP-grasp
HlyD_3
ATP-grasp_3
NQRA
HlyD_D23
ATPgrasp_ST
Motif
Other DBs
NCBI-ProteinID:
AHJ01671
LinkDB
All DBs
Position
2:complement(563167..565227)
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AA seq
686 aa
AA seq
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MFKRILIANRGEIACRIIKTAKSMAIETVAVYSEADRSSLHVKQADFAEFIGPAPASESY
LDIDTIIDAAKKWQADAIHPGYGFLSENPKLAKACSENGIVFIGPPTSAIEAMGSKSQAK
AIMSEANVPLVPGYHGTDNSVEHLLTEAEKIGYPVMLKATQGGGGKGMRVVNSAAEMPLA
IDGAQREALSSFGDKQLLVEKCILQPRHVEVQVFADQHGNCVYLSDRDCSIQRRHQKVVE
EAPAPGLNDELRKQMGDAAVQAAQAIDYVGAGTVEFLLDSRGEFYFMEMNTRLQVEHPVT
ELITGVDLVEWQFKVAAGEHLPISQSEITHNGHSIELRIYAEDADNDFMPSTGRIDYLQE
PISDSNVRLACVRVDSGITQGDTISEYYDPMISKLIVWGRTRDIALKQLKQALTQYHVRG
VTTNIGYLHSIISQPAFADIELDTGFLVTHQQGISEQQNVSDSIWLTLAAVARWNDLTSK
SGSSTLPAPTKQGFRLSVDNVYRFNFTDANANHQVRLQQSSRDTEAQHLNHFTVRCGEEL
HQVTLLESDNQFVVDIDNVRYTFNALSDEQKTTVFYLGQQRTFAHQPSFESPKGKDDELS
PTAPLNGVISAVMVTKGDEVAAGDPLLVLEAMKMEYTITAPVAATVDEVFYQHGDQVQHG
SILLHLISAPDNVCEHKEHEYATSES
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaaagaatactgatcgcaaaccgcggtgaaattgcctgccgaatcattaaaacc
gcaaaaagcatggctatcgagacggttgccgtctattccgaagcggatcgcagcagctta
catgttaaacaagcggatttcgctgaattcattggccccgctccggcgagtgaatcgtat
ctcgatatcgatacgattatcgacgcagcgaaaaaatggcaagccgatgctatccatcct
gggtatggttttctctccgagaacccgaaactagccaaagcgtgcagcgaaaatggtatt
gtttttatcggccctcccaccagcgcaatcgaggctatggggtcgaagtcacaagccaaa
gccatcatgtcagaggcgaacgtgcctttggttccgggctatcacggcacagacaacagc
gttgagcatttgttaacggaagcggaaaaaatcggttacccagtgatgctgaaagcaacc
caagggggcggcggtaaaggcatgcgagtggtcaatagcgcagccgaaatgccgctggcc
atcgacggtgcgcagcgtgaagcgctttcaagctttggcgataagcagcttcttgtcgaa
aaatgcatattgcagcctcgccacgttgaagttcaggtatttgctgaccaacatggcaac
tgcgtttatctatctgatcgcgattgctccattcaacgtcgtcaccaaaaagtagtcgaa
gaagcaccagctcccggtcttaatgatgaactgcgaaaacaaatgggtgacgccgcagtt
caggccgctcaagcgatcgattatgtgggtgctggcacggttgaattcttgctcgatagc
cgcggtgagttttacttcatggaaatgaatactcgtctgcaagttgaacatcctgtcact
gaattgatcactggcgttgatttagttgaatggcaattcaaagttgcggctggtgagcat
ttaccgatctcgcaatctgaaatcacccacaacggtcattcaatcgagctgcgaatttac
gccgaagatgcggacaacgactttatgccgtcgactggacgcattgattatttacaagaa
cccatctcagacagcaatgttcgactagcttgtgtgcgtgttgatagcggtattactcaa
ggcgataccatcagcgaatactacgatccgatgatcagcaaactgatcgtctgggggcgc
actcgtgacatcgccctcaaacagcttaaacaggcgttaactcagtatcatgtacgtgga
gtgacgacaaacatcggttatctgcacagcattatttcgcagccagcctttgccgacatt
gagcttgatacaggtttcctcgtcacacaccagcaaggcataagtgagcagcaaaacgtg
tcggattcgatctggttaacgttagcggcggttgctcgctggaatgatctcacttcaaaa
tcaggcagctcaacgttacccgcgccaaccaaacaaggttttagactgtcggttgacaac
gtttatcgatttaacttcacggatgccaatgccaaccatcaagtacgcttgcaacaatca
tcgcgagatacagaggctcagcaccttaaccacttcacagtccgatgtggtgaggagttg
catcaggtcactctacttgaaagtgacaaccagttcgtcgtcgatatcgataatgtgcgt
tacacctttaatgcgcttagcgacgagcaaaagacaaccgtgttttatcttggtcagcaa
cgtacgttcgctcatcaaccaagttttgaatcaccaaaaggcaaagacgacgaacttagt
ccaaccgcaccactgaacggcgttatctcggcggtcatggtaactaagggtgacgaagta
gcagctggcgatccgcttttggtactcgaagcgatgaagatggaatacaccattaccgct
ccggtagcggcaaccgttgatgaagtgttttatcagcatggtgaccaagtacagcacggt
tccatcctgctgcatttaatttctgcacccgataatgtctgcgaacataaggagcacgaa
tatgctaccagcgaaagttaa
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