Vibrio parahaemolyticus O1 K33 CDC_K4557: M636_11525
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Entry
M636_11525 CDS
T02760
Name
(GenBank) ribosomal large subunit pseudouridine synthase C
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
vpk
Vibrio parahaemolyticus O1:K33 CDC_K4557
Brite
KEGG Orthology (KO) [BR:
vpk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vpk03009
]
M636_11525
Enzymes [BR:
vpk01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
M636_11525
Ribosome biogenesis [BR:
vpk03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
M636_11525
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
DUF3603
Cupin_2
Cupin_3
Orexin
Motif
Other DBs
NCBI-ProteinID:
AGQ98036
LinkDB
All DBs
Position
I:711788..712735
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AA seq
315 aa
AA seq
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MSEIRTQVQFVDIDEDMAGQRIDNFLRNQLKDIPKSMIYRIVRKGEVRVNKKRIKAEYKL
KAGDLVRIPPVTVEKKEEDVAPSTKLNKVAELEHMIIYEDDHMLILNKPSGTAVHGGSGL
KFGAIEALRALRPQARFLELVHRIDRDTSGILLVAKKRSALRHLQAQFREKTVKKFYFAL
VMGQWKSSCKVVNAPLLKNEVNSIVRVNPNGKPSETRFKILEKFEQATLIQASPITGRTH
QIRVHTQYTGHPIAWDDRYGDRRFDAYTGQLGLDRLFLHAANIKFQHPSNDEWMEINAPM
ESKLEKVLVGLRKAN
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagataagaacacaagtccagttcgttgatatcgacgaagacatggcgggtcaa
cgcattgataacttcttgcgtaaccaattaaaagacattccaaagagcatgatttatcga
atcgtgcgtaagggtgaagtgcgcgtgaacaaaaagcgcatcaaagccgaatataaacta
aaagctggcgacctagtccgaattccacctgtaacggttgagaaaaaggaagaggatgtc
gcaccaagcacgaaacttaataaggttgctgaactagaacatatgatcatttatgaagat
gatcatatgctgattctgaacaaaccgtctggtacagcagtgcatggtggtagtggcttg
aagtttggtgcaattgaagcattaagggcattgcgtccacaggcacgcttcctcgaattg
gttcaccgtattgacagagatacctcgggtattttactggttgctaaaaagcgctcggcg
cttcgccatttgcaagcgcagttccgtgaaaaaacggtgaagaagttttacttcgcctta
gtgatggggcaatggaaaagcagctgtaaagttgtgaacgcccccctacttaaaaatgaa
gtgaacagtattgtacgagtgaacccaaacggtaagccatcggaaacgcgtttcaaaatt
cttgagaaatttgagcaagcgacgttgattcaagccagcccaattacggggcgtactcac
caaattcgtgtgcatactcagtacaccggacatcctatcgcatgggatgatcgttacgga
gatagacgttttgatgcctacactggtcaacttggattggaccgtttgtttttgcatgcc
gcgaacattaagtttcaacatccgtctaatgatgaatggatggaaattaatgctccgatg
gaatccaaactagagaaagtgcttgttggattaagaaaggcaaactga
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