KEGG   Vibrio parahaemolyticus O1 K33 CDC_K4557: M636_18445
Entry
M636_18445        CDS       T02760                                 
Symbol
ribD
Name
(GenBank) diaminohydroxyphosphoribosylaminopyrimidine deaminase
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
vpk  Vibrio parahaemolyticus O1:K33 CDC_K4557
Pathway
vpk00740  Riboflavin metabolism
vpk01100  Metabolic pathways
vpk01110  Biosynthesis of secondary metabolites
vpk01240  Biosynthesis of cofactors
vpk02024  Quorum sensing
Module
vpk_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:vpk00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    M636_18445 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    M636_18445 (ribD)
Enzymes [BR:vpk01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     M636_18445 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     M636_18445 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD CHASE7
Other DBs
NCBI-ProteinID: AGQ99042
LinkDB
Position
I:complement(2191005..2192129)
AA seq 374 aa
MPQHTSASPFSPQDFSMMSRALKLARRGIYTTAPNPNVGCVIVRDGVIIGEGYHHRAGEP
HAEVHAMRMAGDKAEGATAYVTLEPCSHYGRTPPCAEGLIKAKVARVVCAMEDPNPKVAG
RGIQMLREAGVEVQVGLLENDAIELNRGFIKFMQTGMPFIQLKMAASLDGQSALSNGKSQ
WITSPQARQDVQCYRAQSGGILSTSKTVMDDNASLNVRWDDLPQSVQAHYELTEVRQPAR
IILDRQQKLSDDLKLFSTEGERIIVSSEGDVCPQLDQSGKIDLAATLKAVATQHNINHLW
VEAGATLASSLIKANLVDELIVYLAPKLMGSDGRGLIGALGLTEMAQVIDLNITDVRMVG
RDIRITATLVRKEI
NT seq 1125 nt   +upstreamnt  +downstreamnt
atgcctcaacacacttcagcatctccattttctcctcaagatttttcaatgatgtcgcgt
gcgctcaagttagctcgacgcggcatttatacgacggctccaaacccgaacgtcggttgc
gtaattgttcgtgatggcgtgatcattggtgaaggttatcatcatcgcgctggagagcct
catgctgaagtgcacgcgatgcgcatggctggtgataaagctgaaggtgcaacggcatac
gttacccttgaaccgtgctcccactatggacgcacgccaccttgcgctgaagggttgata
aaagccaaagtggcgcgagtagtgtgtgcgatggaagatccgaatccaaaagtggctgga
cgtggcatccaaatgctacgtgaagccggggttgaggttcaggttggattgttagaaaac
gatgcgattgagctcaatcgtggcttcattaaattcatgcaaacaggcatgccatttatc
caattaaaaatggcagcaagcttagatggacagagtgcgctaagtaatggcaagagccaa
tggatcacctccccacaggctcgccaagacgtgcagtgttatcgagcgcaaagcggtggc
attctgtctacaagcaaaacagtgatggatgataacgcttctctcaatgttcgttgggat
gatttgccgcagagtgttcaagcgcactatgagctgacggaagttcgccaacctgcaagg
ataatactcgaccgtcaacagaaactgagtgatgaccttaaactgttcagtaccgaaggt
gagcgaattattgtcagcagcgaaggcgatgtttgcccacaactcgatcaaagcggaaaa
attgatttagctgccaccctaaaagcggtcgcgactcagcataatatcaaccatttatgg
gtggaagctggcgcgacgctcgcgagttctctaatcaaagctaaccttgtagatgagttg
attgtctatctcgctccgaaactaatgggaagcgatggacgtggtttaattggcgcgctg
ggattgacggagatggcgcaggtcatcgatttaaatattactgatgtgcgaatggtgggc
agagatatccgtattaccgccacccttgtacgtaaagaaatttag

DBGET integrated database retrieval system