Vibrio paracholerae: SA104470976_01513
Help
Entry
SA104470976_01513 CDS
T08432
Name
(GenBank) T3SS2 effector VopL nucleation of actin polymerization
Organism
vpl
Vibrio paracholerae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VCD
WH2
CCDC53
Motif
Other DBs
NCBI-ProteinID:
SYZ81623
LinkDB
All DBs
Position
1:1640474..1641892
Genome browser
AA seq
472 aa
AA seq
DB search
MFKSTFKVQISQNTEQRNTQKTKDRSTFSISKVSSVLRESKLLGIPKLKNTCEPSLRSVT
KIQLPMTLPGVSNTKELAPPAPPAPPAPPAPPAPPAPQPEKEVKANKSQVQNNEDQSNRS
KLMNEIRAGVKLKPTLPHSENKKASPETELMKEIRTKAKAFSDNRRPSNDGSDIPLPPPP
PLPKATTVKQPGEGRDQLLAEISSFSRTLLKKTGRLEEAVSTTTKHVQPSQVDIFSDNLM
QSAQKVDPDSLLQISENISQYLTAAMQVDWQKVMKSELKGLTSTSALEEALTDKPPYLQV
MWSEISKYPDVYKQADVVSDESPKHKSGRDIVEVAMTRLGGSPHRIFRSDSKLGQVELKS
AQSILESMAHKASQSLANEDKLKLLGDGYKDALFKAFFELPCMEGFEQQNGKVAVQKLKS
AFCSSIESTESAQQDICTFMTQHLANGFQSFTFSGLEARLKELEAALAAKLA
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgtttaagtcaacctttaaagtacaaatatctcaaaacacggaacagcgaaacacgcaa
aaaactaaagacagatcgaccttttcgatcagcaaagtgtcatctgtactccgtgaatca
aaactcttaggaattccaaaactcaaaaacacgtgcgagccatctcttcgctctgtcacg
aaaattcaattaccgatgacattacctggagtcagcaatacaaaagaattggcaccgcca
gcaccgccagcaccgccagcaccgccagcaccgccagcaccgccagcaccgcagccagaa
aaagaagtgaaggcaaataaaagtcaagtgcaaaataacgaagatcagtcaaaccgctct
aaactaatgaatgagatacgtgcaggtgtaaaactgaaaccaaccttaccacactcggag
aataaaaaggcgtcacctgaaactgagctgatgaaagaaattcgcacaaaggcaaaagcg
tttagtgacaatcgacgtcccagcaatgatggtagtgacatcccactgcctccgccgcca
ccgcttccaaaagcaacaacggtgaagcagccgggagaaggtcgcgatcagttacttgca
gagatcagttcgtttagtcgtacgcttttgaaaaaaaccggacgattggaagaagcagta
tcgacaacaacgaaacatgtacaaccatcgcaggttgatattttctccgataacttgatg
caatcagcgcaaaaagtagatccagactcattgttacaaattagcgaaaacattagtcag
tatttgaccgcagccatgcaagtggattggcaaaaagtcatgaagagtgaactaaaaggg
ctaacatctaccagcgctttagaggaagctttgaccgataaaccaccatacctacaagta
atgtggtctgaaataagtaaatatccggatgtatataaacaagcagatgttgtatcagat
gaatcaccaaagcataagtcgggacgagatattgtagaagttgcaatgacacgcttaggc
ggatctccacatcgtatattccgttcagacagcaagctaggccaagttgagcttaagagt
gcccagtcaattctggagagcatggcgcacaaggcatcacaatcactagcaaatgaagat
aaacttaaactattaggtgacggatacaaagacgctctatttaaagcattttttgaactt
ccatgtatggaaggttttgagcaacaaaatggtaaagtagcagtacaaaaacttaaatcc
gctttctgttcttcaatagaaagtacagaaagcgctcaacaagatatctgtacgtttatg
actcaacatctagcgaatggatttcaatcttttaccttttcagggttagaggctagactc
aaagagctagaagcagcattggctgcaaaactggcttaa
DBGET
integrated database retrieval system
