KEGG   Vibrio paracholerae: SA104470976_02568
Entry
SA104470976_02568 CDS       T08432                                 
Symbol
rep
Name
(GenBank) ATP-dependent DNA helicase rep
  KO
K03656  ATP-dependent DNA helicase Rep [EC:5.6.2.4]
Organism
vpl  Vibrio paracholerae
Brite
KEGG Orthology (KO) [BR:vpl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vpl03400]
    SA104470976_02568 (rep)
Enzymes [BR:vpl01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     SA104470976_02568 (rep)
DNA repair and recombination proteins [BR:vpl03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    SA104470976_02568 (rep)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 AAA_30 Viral_helicase1 AAA_22 ResIII AAA_11 SDE2_2C
Other DBs
NCBI-ProteinID: SYZ82607
LinkDB
Position
1:complement(2772919..2774934)
AA seq 671 aa
MKLNPRQDEAVKYVSGPCLVLAGAGSGKTRVITNKIAYLVQQCGYKARNIAAVTFTNKAA
REMKERVAQTLGKGESRGLMVSTFHTLGLNIIRREFKALGLKAGFSLFDDQDQLALLKEL
TEKQLDGDKDLLRLLLSTISNWKNDMLTPPQAKAMAKGEQQQLFAHCFELYQKQMQSYNA
LDFDDLILLPVLLLRSNEEVRQRWQNRIRYLLVDEYQDTNTSQYELVKLLVGERGRLTVV
GDDDQSIYSWRGAKPQNLVLLGEDFPSLKLIKLEQNYRSTSRILRAANILIANNPHVYQK
ALFSELAEGEKLKVILANNEDHEAERVTAEIIAHKFLNRTEYRDYAILYRGNHQSRLIEK
SLTQNRVPYKLSGGTSFFARAEIKDIMAYLRVLVNPDDDNAFLRIVNTPKREIGPATLEK
LGSYANMRGKSLFTASFELGLEQHLSGRGLDNLRRFTEWLVAIADNAERGNTVEAVRSLV
RDIRYEDWLYETSASPKAAEMRMKNVSDLYSWIVADLEGDNPDQQEKSLKEVVQRLTLRD
MMERGEENDDSDAVQLMTLHASKGLEFPYVYLIGAEEGILPHQTSIDEENVEEERRLMYV
GITRAQRELTFMVCKERRQFGELIKPTQSRFLDELPQEDIEWEVKKKVVTQEERMAKGQA
HIANLRSMFKK
NT seq 2016 nt   +upstreamnt  +downstreamnt
atgaagctgaacccaagacaagatgaagcggtcaagtacgtctccggaccctgtctggta
ctggcgggtgcaggctctggtaaaacgcgcgttatcaccaataaaattgcttatttggtg
cagcagtgtggctataaagcacgtaacattgcggcagtgacgtttaccaataaagcggcg
cgtgagatgaaagagcgcgttgctcaaacacttggtaaaggtgagtcgcgcggattaatg
gtatctaccttccatactctcggcttaaatattatccgccgtgagtttaaagctttgggc
cttaaagccggtttttcactgtttgacgaccaagatcagcttgcgctacttaaagaactg
accgaaaagcagctcgacggcgataaagatctgctgcgcttgctgctaagcaccatttct
aactggaaaaatgacatgctgactccaccgcaagccaaggcaatggcgaaaggggaacag
cagcagctttttgcacactgctttgagctttaccaaaaacagatgcagtcttacaacgca
ctcgatttcgatgatttgatcttgctgccggtgttactgctacgcagcaatgaagaagta
cgccagcgctggcaaaatcggattcgctatctgttggtggacgaatatcaagataccaac
accagccaatatgagttggtcaaactcttagtgggcgagcgtggccgtttgactgtggtg
ggagatgatgaccaatccatatattcatggcgcggagcgaagccacagaacttagtactc
ttgggcgaagattttccaagtttaaagctgattaagctcgaacaaaactaccgctcgacc
agccgtattttgcgtgcggcgaacatcttaattgccaataacccccacgtttaccaaaag
gcgctcttttctgaattagcggaaggggaaaagctcaaggtcattctggccaataatgaa
gatcatgaagcagagcgagtgaccgcagagatcatcgcccataagtttctcaatcgaacc
gaataccgagattacgcgattctttatcgcggaaaccatcaatcgcgactgattgaaaaa
tcgctgactcaaaaccgtgtgccgtacaaactttcaggcggcacttctttttttgcgcgc
gcagagatcaaagacatcatggcttacctgcgagtgctggttaaccctgatgatgacaac
gcatttttgcgcattgtgaatacgccgaagcgcgaaatcggcccagctacgctcgaaaag
ttaggcagttacgccaatatgcgtggtaaaagtctatttaccgccagttttgagctcggt
ttagagcagcatttgagcgggcgagggcttgataacttacgccgcttcaccgagtggctg
gtggcgattgccgataatgctgagcgtggtaacacggtggaggccgtacgctccttggtg
cgtgatattcgttatgaagattggttgtatgagacctctgccagtccgaaagcggccgaa
atgcgcatgaaaaacgtctccgatctctattcatggatagtcgcggatttagaaggcgat
aatcccgatcagcaagaaaaatcgctgaaagaagtagtacagcgcttaaccctgcgcgac
atgatggagcgtggcgaagagaacgatgacagtgatgcggtacaactgatgactctgcac
gcctcaaagggcttagaatttccgtacgtgtatttgattggcgctgaagagggcattttg
ccgcatcaaaccagcattgatgaagagaacgtcgaggaagagcggcgcttaatgtatgtc
ggaatcactcgggcgcagcgtgaactgacgtttatggtatgtaaagagcgccgccagttt
ggtgagttgattaaacctacccaaagccgttttcttgatgagctaccgcaagaagatatt
gagtgggaagtgaagaaaaaagtcgtgactcaagaagagcgtatggccaaaggccaagcg
cacattgcgaacttaagatcgatgtttaaaaagtaa

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