Virgibacillus dokdonensis: A21D_02699
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Entry
A21D_02699 CDS
T05261
Symbol
hemY
Name
(GenBank) Protoporphyrinogen oxidase
KO
K00231
protoporphyrinogen/coproporphyrinogen III oxidase [EC:
1.3.3.4
1.3.3.15
]
Organism
vpn
Virgibacillus dokdonensis
Pathway
vpn00860
Porphyrin metabolism
vpn01100
Metabolic pathways
vpn01110
Biosynthesis of secondary metabolites
vpn01240
Biosynthesis of cofactors
Module
vpn_M00926
Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme
Brite
KEGG Orthology (KO) [BR:
vpn00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
A21D_02699 (hemY)
Enzymes [BR:
vpn01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.3 With oxygen as acceptor
1.3.3.4 protoporphyrinogen oxidase
A21D_02699 (hemY)
1.3.3.15 coproporphyrinogen III oxidase (coproporphyrin-forming)
A21D_02699 (hemY)
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GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
DAO
NAD_binding_9
Pyr_redox_2
HI0933_like
Pyr_redox_3
Thi4
MCRA
Pyr_redox
Trp_halogenase
MurD-like_N
DUF6451
FAD_oxidored
FAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
AUJ25745
UniProt:
A0A2K9J232
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Position
2929197..2930606
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AA seq
469 aa
AA seq
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MNNSKQIVIIGGGITGLSAAYYLQKQLVEKQLPYKVKLVEASSHLGGKIRTLHRDGFTIE
QGADSMLIRKQPAMKLVEELHLEDQIVRNATGKSYILKGNKFHRMPQDTYMGIPKNARSI
WNSTLISPKGKLRALADLWKGKRKEETDESLAAFFRRRFGNELLHNQIETLLSGIHSGNI
EEMSLKASYPQFRQLEQEYGSLMKGLNKTIPKVAKDKGKGPAPGAFFSFQNGLGTLVDRL
AEEIGEENMMLQTAVDHIEKKEHGYHVLLSDGNVYKADAVIIATPHFTVPKIFSQYDFFQ
PFVEVPATSTANIVLAFDKVKIKKDIDGTGFLVNKNSNYHITACTWTHKKWPLTTPEGKV
LMRCYVGRPDNEEIVEASDDALTDIVLKDLHKAMKLKGDPTFSVVTRWRNGRPQYTLGHS
ERLAEIRKQARLQLPGVFLTGCSYDGQGIPDCIEQGERTAQKALHFVLR
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgaataattcaaaacaaattgtcattataggcggcggtataacaggtttatctgctgcc
tattatttacaaaaacagctcgttgaaaagcaacttccttataaggtgaagcttgtggaa
gcaagtagtcatctaggggggaaaataagaacgttgcaccgggatggatttacgattgaa
caaggtgcagactcgatgttaattcgtaaacagccggctatgaaattagtggaagagcta
catcttgaagatcaaattgttcgtaatgctacgggaaaatcctatattttgaagggaaat
aagttccaccgtatgccacaagatacctatatgggaattccaaaaaatgcgcgttctata
tggaattctacattaatttctccgaaaggaaaattaagagctttggcagatttatggaag
ggaaaacgaaaagaagaaacagatgagtctttagcagctttttttagacgtcgctttgga
aatgaattactccataaccagattgaaacgctgttatctggaattcattctggaaatata
gaagaaatgagtttaaaagcttcttacccacaatttcgccaattggagcaagaatatggc
agtttaatgaaagggttaaacaaaactattcccaaagttgcaaaagataaagggaaaggg
ccggcacctggtgctttcttttcctttcaaaacggtttaggtactctagtagatcgttta
gcagaagaaattggagaagagaatatgatgctccaaacagcggttgatcatattgaaaaa
aaggaacacggctatcatgtactgttaagtgatggaaatgtttataaagcagatgctgtt
attatagctacaccacattttaccgtgccgaaaatatttagtcagtatgatttctttcaa
ccttttgtggaggtacctgccacatcaacagctaatattgtgttggcgtttgataaggtg
aaaataaaaaaagatatagatggcacaggctttcttgttaacaagaacagcaattaccat
attactgcttgtacatggacacataagaaatggccgttaacaaccccagaagggaaagtt
ttaatgcgctgttatgttgggagaccggataacgaagaaatagtcgaggcgtcagatgat
gcgctaacagacattgtgctaaaagatttacataaagcaatgaaattaaaaggtgatccg
acatttagtgttgttacacgttggcgaaatggaagaccgcaatatacactcgggcactcg
gaacgacttgctgaaattagaaaacaagctaggctgcagttacctggtgtttttttaaca
ggttgctcctatgatggtcaaggtattccagactgcattgaacaaggagaaagaacagct
caaaaagcattacattttgttttacgttaa
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