Vespula pensylvanica (western yellowjacket): 122630194
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Entry
122630194 CDS
T07720
Name
(RefSeq) general transcription factor IIH subunit 4 isoform X1
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
vps
Vespula pensylvanica (western yellowjacket)
Pathway
vps03022
Basal transcription factors
vps03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
vps00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
122630194
09124 Replication and repair
03420 Nucleotide excision repair
122630194
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vps03021
]
122630194
03400 DNA repair and recombination proteins [BR:
vps03400
]
122630194
Transcription machinery [BR:
vps03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
122630194
DNA repair and recombination proteins [BR:
vps03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
122630194
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
122630194
NCBI-ProteinID:
XP_043670381
LinkDB
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Position
6:complement(4673327..4675620)
Genome browser
AA seq
467 aa
AA seq
DB search
MSNAISGKNLLRPTGLQCKNLHEYLKSRPPEVLSKLYHNPPICLAVFRELPVIAKHYIMR
LLFVEQAVPQAVIASWCSKLYLEDHQKVVVILKELNIWRETSLPGGLPGWIVHASFKKNL
KIVLLGGGKPWTMSNQLETDSKPRDVAFLDAYALERWECVLHYMVGSQQQEGISADAVRI
LLHAGLMKRDEADGSPVITQAGFQFLLLDTASQVWYFILQYLDTIEARGLNLVECLTFLF
QLNFSTLGKDYSTEGMSEGLLTFLQHLREFGLVYQRKRKAGRFYPTRLALNIATGQNKPL
AKESGKEGYIVVETNYRVYAYTNSNLQVALLGLFCEMLYRFPNLVVSILTRDSVRQALKS
GITAAQIIGYLQQHAHNKMLEAGPPTLPPTIVDQIKLWENERNRFLFSEGVLYSQFLSQT
DFEVLRNHALSTGVLIWQNDRKRTMVVTKAGHDDVKKFWKRYSKGSS
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaacgcgataagtggaaagaatttgttacgtcctaccggattacaatgcaaaaat
ctacacgaatatttaaagtcacgtcctccagaagtattaagtaaattatatcataatccg
cctatatgtttggctgtgtttcgtgaactgcctgtgatagcaaaacactatatcatgaga
ttattattcgtcgaacaggcagttccacaggcagtaattgcttcttggtgttctaaactt
taccttgaagatcatcagaaagtagttgtaattttaaaagaattaaatatatggagagaa
acatctttacctggaggattaccaggttggattgttcatgcctctttcaaaaaaaatttg
aaaattgttctattgggaggtggtaaaccatggacaatgtcgaatcaattagaaactgat
agtaaacctagagacgtagcatttttagatgcatatgcattagaaagatgggaatgtgtt
ttacattatatggttggttctcagcaacaagaaggtatctcggctgatgctgtgagaata
cttttacacgccggtttaatgaaacgagacgaagctgatggaagtccagttattacacaa
gcaggttttcaattcttattgttagatactgcatcacaagtatggtattttattctccaa
tatttagatacgatagaagcaagagggcttaatttagttgagtgccttacatttctattt
caattaaatttttcaacacttggtaaagattatagtactgaaggcatgtcggaaggttta
ttaacatttctacaacatctaagagagtttggacttgtttatcaacgtaaacgaaaagct
ggaagattttaccctacgcgtttagcattaaacatagctactggacaaaataaaccatta
gctaaggaaagtggaaaagaaggatatatagtagttgaaactaattacagagtatatgct
tatactaattcaaatttgcaagttgctttgcttggattattttgtgaaatgttatataga
ttcccaaacttagtggtttcaatattaacaagagattcagtaaggcaagctttgaaaagt
ggaattactgcagcacagatcataggttatttacagcagcatgcacataataaaatgtta
gaggcaggcccacctacattgcctccaactattgtggatcaaattaaattatgggaaaac
gaaagaaatagatttttgtttagtgaaggagtcctatatagtcaatttctttctcaaact
gattttgaagtgcttaggaatcatgcactttctacaggtgttctgatctggcaaaatgac
agaaaacgaacaatggtggtaacaaaagcgggccatgatgatgtgaaaaagttttggaaa
agatattcaaaaggttcctcttaa
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