Vespula pensylvanica (western yellowjacket): 122633160
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Entry
122633160 CDS
T07720
Name
(RefSeq) chondroitin sulfate proteoglycan 4 isoform X1
KO
K08115
chondroitin sulfate proteoglycan 4
Organism
vps
Vespula pensylvanica (western yellowjacket)
Brite
KEGG Orthology (KO) [BR:
vps00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
vps00535
]
122633160
Proteoglycans [BR:
vps00535
]
Cell surface proteoglycans
Others
122633160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Laminin_G_2
Laminin_G_1
Cadherin_4
Laminin_G_3
T-box
Cadherin_C_2
hEGF
Motif
Other DBs
NCBI-GeneID:
122633160
NCBI-ProteinID:
XP_043676675
LinkDB
All DBs
Position
11:complement(4998618..5072724)
Genome browser
AA seq
2356 aa
AA seq
DB search
MKKKQRRSLMFLNDMGLLMFLAVTASILGHCQTDEKVSFYGASYIHLPVQEAKGATDISF
RFRTHLSDAMLLLAAGKTDYCLIKLEAGRLKVHINLGAGESEMASARGLTLNDLSWHEVN
LTRREANITLQIDVIHTTRSLLPGRFFELNIHYGVFIGGRGDFNELFLGHTDYLRGCMAD
IIYNGARVIEYARSRRGQSDATAVTWGCSPEFDATWNTEVSFVEDGAFTAIPRAIPRSGS
RWEFDMKTGTESGLLLYNTGQSSYADYLGIELFEGKIRLLMNKGNGPTELIHGNVVSDGK
WHQIVVDFSPSGIGITVDRQEKTMALPSGGNRYLDLADTLYIGGTELNKRARALGKGLRS
GDVSYKGCLRNMMLDNKELGLPDVKVSQGIVVGCVWGFPCVEADPCVNDALCEQLGVDSF
KCICDQPLCIKPNFAEDYKVYSNANLPVNLEILSLSPLSVSEGEHVLVTSDNIGMVLDIA
KYGVEEDGVVFSLVTPPTYGTLALDLLTSRTDRSFTLQDINRDKIQYMHDGSETTEDSMI
LELTLVAGRGYTLPGYLRGRLRFPLHVNVTPVNDPPLLEIPTAKVLRLAQGTRKTLTKEL
IWAIDADTPSETLVYTVLRTDTDAGHIERVTYPSKPIDTFTQAELMQGLIAYVHRGNAKP
NAMLGLQVSDGIESSQPAYLRVSAYPLQIKLLHNTGLVVVHRSFSYLTPANLSFITNSDD
STIDIRYDISTSPQYGTLQKLKDVSSSWQNADHFTSRDVDLHTIRYLHNIGSPTQDEFKF
QASVREVKTQQTFDFRITFIDLELKEIKRIPVNFTNTAEAIVTGQNLKYQTNPLITSPNK
ILFTLNGGPRYGELLVTRRKINAGDSFTQEDVDTGKVRYRLYRRAYSIIHDELAFRVSAP
QCIDILSTLSLKHHLAKNNKPVEGTETLKIEEGSKVALKMIRTNTMDYGVSALIYNLTIN
PRHGWLVVLNRTKSQIRSNATYFTSEELLSQTVYYIHDDSETKEDSFEFIGVALDSIDFM
YVGRFRIEVIMKNDNPPERIVNKIFHVVSKGEKLITNKDLAYIDKDINTKPSDIKYTRKD
NGKSGIYKITDPSVQIREFTQKNIDDERILFRHYGDDCEKLEYTVSDGHFHTDGILEIEA
SPPYIRLKESNGSIVQFNRSVVFRSKELEIETNVYMLEKEVKYTILEKPKYGILLKHTKE
TTTFTGEDLIHSSISYRHMGSSLNKDDFKFKISAKGAETEGIFTIKVYPASYWEAMTVLN
NKTIFVEESTSLLINRKSLEIMHPKISPSEIIYFLRDWPQNGYLEVQSHDEHAEESKEEY
VGNWVKQFDQALINDGRLFYVQSVTNQTNDKFVVDVTNGIMWMYALSVNIIIVPDKLYVE
AKNLNVVEGKSVILDETDFIVITSYYAGKVTDYRIVEKPKHGVVIDSTKNSQIKKFPQKH
LNSGVILYKHNGDEFSKDSFKMVVIAGDKISEPFDVWIVVQPINDEVPVLVNKTKLNVWQ
GGSVILMSSYLAATDNDTVPSEITFNVTSMKNGYISMLGSDIEIYTFTQQQIDDSKIVFT
HTNGSEAEFSFVLNDGVHTTEAYGISIVAKPVRLTVEQNVALNVFPLTRKVISNKLLLIR
CSDEAREIRYNVRNGPHLGKIIMESGEGVWLEVDRFTQKDINDSKVFYEHRIRFMDLAAN
DSFTFDVEAHYTGSITNQVFHIDISVSSGGLDRYVSAKTVRVEEGGSAQVIMNISGIISF
LQTNAGINKPAVLSRLVNQPSHGHVMLLPDLNVTTFTQPQIEGGKIAYYHDHSDTLEDRI
FFSLYLTPGHVLLCNTSIPVIIEPINDEPFKLITNAPYLTVVQNQNQTITRDNLLTIDPD
TPAEEIIYDVISGPTFGRLLLLPFDQNSSEVQQVNKFSQLDVDSNRLVYEHNGPLQAASF
YFRVWDGRFNPTYTVFNVHVLAIRLNVTVPSPVKLQQGSNVASISEDNVKLDTNARQDLV
IYEVTTNPKHGVLYVRDAAATNFKQTDLLSESVMFLQTDMTVSNDSLELSARLSGFEQQH
IRVKIRVVPLMIINPMIALMGEKNQITLQHMDATPLAKLTSSNPVYTIIRKPKYGKIKRI
IRSSSTSGEKRGTREREIGRFSHQEIVSGVIYLVCKKVPSMEYEGVSDSFAFILAASIFQ
PAAGEFEIRVKFDMDDYNSTLAGPMDPIGHEGEMAIAPNMSNDYLLILGMLLGAFLLSII
VIITIRCRHNRYKRTEEDKPETTPSVGVMPLPRPPDHLMPTTPHLKRFANEHGTITSSTP
LPVLPSMTSTLPQCKVIPLNPLESITGSEVDVSARYPYGVADGDEWSSFDTSDLPCQSAT
TQRTNNPLLRRNQYWV
NT seq
7071 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagaagcaacgaaggagcctaatgtttctcaacgacatgggactgctaatgttc
ttagccgtaacggcctccatcttgggtcactgccaaactgatgaaaaagtatcattttac
ggagcaagttacatccatcttccagttcaagaggccaagggtgcaactgacatcagtttc
cgctttcgaactcatctttctgatgcgatgctgctattggctgccggcaagacggattac
tgcttgatcaaactggaagcaggcagattgaaggttcacataaatctcggtgccggtgag
agcgagatggccagtgctcgtggattgacgctgaacgaccttagttggcacgaggtcaac
cttaccaggcgcgaggctaacatcactctgcaaatcgacgttatacacacgacgagatcc
cttctaccaggacgttttttcgagctgaatatacactatggggtctttatcggcggacgg
ggcgactttaacgagctatttctaggacacaccgattatttacgtggatgtatggctgat
ataatctacaatggtgcaagagtaatagaatacgctagatctagaagaggccaatccgat
gcaactgcagtaacgtggggatgttcaccggaattcgacgccacatggaacacggaagta
agcttcgtcgaggatggtgccttcacggcgattccacgagctataccacgttccggatca
agatgggaatttgatatgaagaccggtacagaaagtggtttgcttctctacaacactggc
caatcttcctacgctgattacttaggaatcgaattgttcgaaggcaagatacgactatta
atgaacaaaggaaatggtccaacggagttaatacatggtaacgtggtgtccgatggtaaa
tggcatcaaattgtcgtcgactttagcccaagtggtatcggtataaccgtcgatcgtcaa
gaaaagacgatggctttgccctccggtggtaatcgttacctggacttggccgacacgctc
tatatcggtggtacggaactcaataaacgtgccagagcactgggtaaagggcttaggtca
ggtgacgtgagttataagggttgtctccgtaacatgatgctggacaacaaggagcttggt
ttacccgatgtcaaggtcagtcaaggtatagtcgtaggatgcgtttggggatttccatgc
gttgaagctgatccatgcgtcaatgatgctttatgcgaacaactgggcgtcgattcgttc
aaatgtatttgcgatcagcctctctgtatcaaaccaaatttcgccgaagactataaggtt
tactcgaacgctaatcttccggtaaatttggagattctctctctgtcaccactttcagta
tcggaaggagaacacgtactcgttacgagcgacaacatcggtatggttctagacattgcc
aaatatggcgtcgaagaggatggcgttgttttcagcttggtaacaccacctacttatgga
acattggctttggatctcttaacttcgagaactgatcgttccttcactttgcaagacatc
aatcgcgataagatacagtacatgcacgatggaagcgaaaccacagaagatagcatgata
ctggaactgacgttagtggcaggaaggggatacacgcttccaggatatctccgaggaaga
cttaggtttcctcttcatgtcaacgtcacccctgtcaatgacccaccacttttggaaata
ccaacggcaaaagtgctacgattggctcaaggcaccagaaaaactctaacaaaagaatta
atttgggccattgacgcggatactccgtcggaaacgctggtctacacggtcttgcgcact
gacactgatgctggacatatcgaaagagttacttatccctctaagccgatcgacaccttc
acgcaagccgaactgatgcaagggctgatcgcttatgtacaccgtggcaacgcgaaaccg
aatgctatgctgggtttgcaagtaagcgatggaattgaaagcagtcagccagcataccta
cgagtctcggcttacccgctacagattaaacttctgcataacaccggattggtcgtggtg
catcgatccttctcttatttaacgccagcgaatttgtcatttataacgaattccgacgac
agtacgatcgacatacgttatgatatcagtacgtcacctcaatacggtacgttgcaaaag
ctgaaagacgtttcaagcagctggcaaaacgctgatcatttcactagtcgtgacgtggat
ctacatacgatccgttaccttcacaatatcggtagtccaacgcaagacgaattcaaattt
caagctagcgttcgcgaggttaaaactcaacagacctttgattttcgtattaccttcatc
gatctcgaattaaaagagatcaagagaattcccgttaattttacaaatacagcagaggca
atcgtaaccgggcaaaatctcaagtaccaaaccaatccattgatcacatcaccgaacaaa
atattatttacattaaacggtggaccgagatatggcgagctcttggtaacgagacgaaag
ataaatgctggcgatagtttcacgcaagaggatgtagatacgggtaaagtacgatatcgt
ttgtacagaagagcctactcgattattcacgacgaattagcgtttagggtaagtgcacca
caatgcatcgatatactatcgacgttatccctgaaacatcatttggcgaaaaacaacaag
cccgttgaaggaacggaaaccttgaagatcgaggaaggttcgaaagtagctttaaaaatg
atacgtacgaataccatggattatggtgtatccgccttgatttataatctcacgataaat
ccacgtcacggttggctggtcgtattaaatcgaacgaagtcacaaattcgaagcaacgct
acgtacttcacttccgaggaattgctttctcaaacggtttattacatccacgatgattcc
gagacaaaggaagactccttcgaattcattggcgttgccttggattccatagattttatg
tacgttggacgttttcgcatcgaagttattatgaagaacgacaatccacctgaacgaata
gtcaacaagatctttcacgtggtatccaagggagaaaaattgataactaataaagatctt
gcctatatcgataaagacattaataccaaacctagtgatatcaagtacacgcgtaaagat
aacgggaagagtggcatttataaaataaccgacccttccgtacaaattcgtgagtttaca
caaaagaatatagacgacgaaagaatactcttcagacattatggcgatgactgtgagaaa
ctcgaatacaccgtcagcgacggccacttccatactgatggtatcctcgaaatcgaagca
agtccaccttatatcagattgaaggaaagtaatggatccatcgttcaatttaacagaagc
gttgtatttcggtcaaaggaattagagatcgaaacgaacgtttacatgctcgaaaaagaa
gttaaatacacgatcttggagaaacctaaatacggaatacttttaaaacacacgaaagag
actaccacgtttaccggagaggatctgatccatagttcaatatcctatcgacacatgggc
tcgtcgttgaataaggacgactttaagttcaaaatttcagctaagggtgcagaaaccgaa
ggcatctttacgattaaagtttatccagcgagttattgggaagccatgacagttctgaac
aacaaaacgatctttgtcgaggagtcgacgagtctcctgataaatagaaagagcttggag
ataatgcacccgaaaatttcgccttccgaaataatttatttcctacgggattggccacaa
aatggttatctggaagttcagagtcacgatgaacatgccgaggaaagtaaggaagagtat
gttggtaattgggtcaaacaattcgatcaagctctcataaacgacggtcgtctattttac
gttcaatctgtgacgaatcaaacgaatgataagtttgtggttgacgttacgaatggtatc
atgtggatgtatgctctgagcgtgaacattattatagttcctgacaaactttacgtcgag
gctaagaatctaaatgtggttgaaggtaaaagcgtgattctggatgaaactgattttatc
gtgataacttcgtattacgctggtaaggtcacagattatcgtatagttgagaaaccaaag
cacggcgttgtcatcgattctacgaaaaattcgcaaatcaaaaagtttcctcaaaaacat
ttgaattctggtgtcatattgtacaaacacaacggcgatgagttttcaaaagattcgttc
aaaatggtcgtcatcgctggggataagatcagtgagccctttgacgtttggatcgtggtc
caacctatcaacgacgaggtgcctgtccttgtgaataaaactaaattgaacgtttggcaa
ggtggttcggtcatcttgatgtcttcttacttggctgctacggacaatgataccgttcca
agcgagataacgtttaacgtaaccagtatgaaaaatggatacatttctatgctaggatct
gatatagagatttatacttttactcaacaacaaattgatgattccaaaatcgtttttacg
cataccaatggttctgaagcggaatttagcttcgtgttaaacgacggtgtgcatacgaca
gaggcgtatggtatatcgattgtggcaaagcccgtacgattaaccgtggaacaaaatgtc
gcgttaaatgtctttcccttaacaagaaaagttatttcgaacaagcttttgttaataagg
tgttcagacgaagccagagaaataaggtacaatgtacgaaacggtccacacttgggaaaa
atcattatggagagcggtgaaggtgtatggctcgaggtcgatcgatttactcagaaagac
ataaacgacagcaaagttttttatgaacatagaatacggttcatggatttagcagccaac
gactcgttcacgttcgatgtcgaagcccattatactggatctataacgaatcaggttttt
cacatagacatctctgtctcgagtggtggcttggatagatacgtttcagctaaaactgtc
agagtcgaggaaggtggttccgctcaagttattatgaacatcagtggaataataagtttc
cttcaaacgaacgctggcataaataaacctgctgtattatcaagactggtcaatcaaccg
agtcatggtcatgtgatgttgctaccagatctcaacgtgactacctttacacagcctcaa
atcgaaggtggaaaaatcgcgtattatcacgatcattcggatacattggaagatcggatt
ttcttttcgttgtacttaacacctggacatgttttactgtgtaacacaagtataccggtg
ataatcgagcccatcaacgatgaacccttcaaacttattaccaacgcaccgtacctaacc
gttgttcaaaatcaaaatcaaactattacacgggacaatctattaacgatcgaccctgat
actccagctgaagaaatcatttatgacgttatatcgggacctacttttggcagactattg
cttttacctttcgatcagaacagttcggaagttcagcaagtgaataaattctcacaactc
gacgtggattctaacaggttggtttacgagcacaatggccccttgcaagctgcctctttc
tattttagagtctgggacggtcgtttcaatccaacttatacagttttcaacgtccacgtt
ctggcaatccgtttgaatgtgacggtaccaagtccagtgaaattacaacaaggctcgaac
gtagcgtcgatatcggaagacaacgtgaaactcgacacaaatgcaagacaggatttagtg
atctacgaagtgacaaccaatccgaagcacggtgtgctttatgtaagggatgccgctgca
acgaacttcaaacagacggatttattatccgaaagtgtaatgtttttacagacggacatg
acagtttccaatgatagtttggaattatcagctcgtttaagcggttttgaacaacaacat
attcgcgttaaaatcagagtggtcccgttgatgataattaatccaatgatagcgttgatg
ggagagaaaaatcagataactctgcaacacatggatgcaacacctttggcaaaactcacc
agcagcaatccggtctacactatcatcagaaaaccaaagtatggaaagatcaagagaatc
ataagaagttcctcgacttcaggagaaaaaaggggaacgcgtgagagagagatcggaaga
ttctctcatcaagagatcgtctctggtgttatatatctagtctgtaaaaaagtaccaagt
atggaatacgaaggagtaagtgacagtttcgcatttattctagcagcctcgatatttcaa
ccagcggctggtgaattcgagatacgcgttaaattcgacatggacgattacaacagcact
ttggcaggtcctatggatcccatcggtcacgagggtgaaatggcaatcgcacctaacatg
agtaacgattatttgctcattttgggcatgttgcttggtgcttttctcttaagtatcatc
gttataatcacgatcaggtgtagacacaatcgatacaaacgtaccgaagaagacaaacct
gagacaacgccatcggttggtgtaatgcccttaccaaggccacctgatcatctaatgcca
acgacacctcatctcaaacgtttcgcaaatgaacacggcacgataacatccagcacgcca
ttaccagttttaccaagtatgacttcgaccttgccgcaatgcaaggtaataccactgaac
cctctggaaagtataacaggttcagaggttgacgtatctgcgaggtatccttacggtgtt
gcggacggtgacgaatggagcagctttgacacgtcagatttaccttgtcaatcggccact
acacaaagaaccaataatcctttactgaggagaaatcagtattgggtctag
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integrated database retrieval system
