Vigna radiata (mung bean): 106756312
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Entry
106756312 CDS
T04126
Name
(RefSeq) probable NOT transcription complex subunit VIP2 isoform X1
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
vra
Vigna radiata (mung bean)
Pathway
vra03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106756312
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vra03019
]
106756312
Messenger RNA biogenesis [BR:
vra03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
106756312
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
106756312
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
106756312
NCBI-ProteinID:
XP_014494177
UniProt:
A0A1S3TK92
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Position
2:complement(5269487..5279179)
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AA seq
658 aa
AA seq
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MSGLLNSSLNGSASNLPDGAXRSFATSFSGQSGAASPIFHHTGAIQGLHNIHGSFNVPNM
PGSLTSRNSTINNVPSGGVQHSTGSLSSGRFTSNNLPVALSQLSHGSSHGHSGVTNRGGI
SVVGNPGFSSSTNGVGGSIPGILPTSGAIGNRNAVPGLGVSPILGNAGPRITSSVGNMVG
GNIGRTGGGLSVPALASRLNLGANSGSSGLGMQGQNRLMSGVLPQGSPQVISMLGNSYPS
AGGPLSQSHVQAVSNLNSMGMLNDVNTNDSSPFDINDFPQLTSRPSSAGGPQGQLGSLRK
QGLGVSPIVQQNQEFSIQNEDFPALPGFKGGNADYAMDMHQKEQLHDNAVPMMQSQHFSM
GRSAGFSLGGTYSSHRAQQQQHAPSVSSGNVSXSSVNNQDLLHLHGSDIFPSPHSTYHSQ
TSGPPGIGLRPLNSPNTVSGMGSYDQLIQQYQQHQNQSQFRLQMSAVNQSFRDQGMKSIQ
TTQPDPFGLLGLLSVIRMSDPDLTSLALGIDLTTLGLNLNSSENLHKTFGSPWSDEPAKG
DPEFNVPXCYYAKQPPXLHQGYFSKFSVETLFYIFYSMPKDEAQLYASNELYNRGWFYHK
EHRLWFIRVPNMEPLVKTNTYERGSYHCFEPSIFETVRKDNFVLHYEMLEKRPHLPQH
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggttacttaattcttctctgaatggatctgcttcaaatcttccagatggtgcc
ngacgatcttttgcgacatcgttttctggtcagtctggtgcagcctccccaatttttcat
cacactggagctattcaaggattgcacaatattcatgggagctttaatgttcccaacatg
cccggttcactcacatcgagaaattcaactataaataatgtgccatctggtggtgttcaa
cattccactggaagcctttctagtggaagatttacatccaacaatctaccagttgcattg
tctcagctatctcatggaagctcccacggacattcaggagtcaccaatagaggaggtata
agtgttgtaggaaaccctggatttagtagtagcacaaatggagttggtggttctattcct
gggattcttcctacatctggtgcaattggtaaccgaaatgctgttccaggattgggagta
tccccaattttgggaaatgcaggtcctagaatcactagttctgtgggaaacatggttgga
gggaatatcggaaggactggtggaggattgtctgtgcctgctcttgcatctcgtctaaat
ttgggtgcaaacagtggatccagtggtttaggtatgcaaggacagaatcgattaatgagt
ggtgtgcttccacaaggatctccacaggtaatttcaatgctaggaaattcttatcccagc
gctggaggtccactttcccaaagccatgtgcaagcagtaagtaacttgaactctatggga
atgctgaatgatgtgaataccaatgacagctccccttttgatatcaatgacttccctcaa
ctgacaagtcgtccaagttctgctggagggcctcaaggacagttgggttctttacgaaaa
cagggtcttggcgtcagtcccattgttcaacaaaaccaagagtttagcattcagaatgaa
gatttcccagctttaccaggattcaaaggcggtaatgcagattatgctatggatatgcac
cagaaagaacaacttcatgacaatgctgtaccaatgatgcaatcacagcatttctctatg
ggaaggtcagctggtttcagcttggggggtacatattcgtcacatcgagcacaacagcaa
cagcatgctccttctgtcagtagtggcaatgtctctttntcatctgttaacaaccaggat
cttctccatttgcatggatcagatattttcccttctccacattcaacctatcattcacag
accagtggacctcctggtattggattaaggcctttaaattctccgaatacagtttctggt
atgggttcatacgaccagcttattcagcaatatcaacagcatcaaaaccagtcgcagttc
cgcctacaaatgtcagctgtaaatcaatcttttagggatcagggcatgaagtctattcaa
accacacaaccagatccatttggtttgcttggcttgttaagtgtgatcaggatgagtgat
cctgacctgacgtctcttgctcttggaattgatctaactaccttggggttaaatttgaat
tcatcagaaaatcttcacaagacctttggttctccatggtctgatgaacctgctaagggc
gatccagagtttaatgtgccanaatgttattatgctaaacagccacctnctctacatcaa
ggatacttttcaaagttttcggtggaaacattgttttacatattttacagcatgcccaaa
gatgaagcacaattatatgcctccaatgagctttacaacagaggttggttttatcacaag
gaacatcgtttgtggtttataagagttcccaacatggagccgctggttaaaacaaacaca
tacgagaggggatcttaccactgtttcgaaccaagcatatttgaaaccgtccgcaaggat
aattttgttcttcattatgaaatgttggaaaagagaccccatctgcctcaacattga
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