Vigna radiata (mung bean): 106762082
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Entry
106762082 CDS
T04126
Name
(RefSeq) uncharacterized protein LOC106762082
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
vra
Vigna radiata (mung bean)
Pathway
vra03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106762082
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vra03019
]
106762082
Messenger RNA biogenesis [BR:
vra03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
106762082
mRNA degradation factors
5'-3' decay
Decapping complex
106762082
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
106762082
NCBI-ProteinID:
XP_014501276
UniProt:
A0A1S3U5J9
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Position
5:30386872..30399758
Genome browser
AA seq
829 aa
AA seq
DB search
MVDMDGFGTGGDVGGVPNTEDLRQLGNVSTEGAVFDASQYAFFGSDSAVQEVELGGLEDD
DDLIESNGEFIVNREEAEDLKSLSDIDDLSTTFWKLNKVVSGPKSTEYIGEQGSRQNSAA
EWAQKDDVLNWYEQNAYDNEGSLDGRRMSSQPHSSLSQLHEPKALYRTSSYPEQPRQQQH
HQLQPGESAPNWFDQHMYGTETTHDGKRWSSQPHSTIAHLQETRPLHRTSLYPDKQPEFP
HFSSEPILVPNSSFTSYPPPSGRSQQASPSHNTGHLNIPYHAMGGQMALSPQNRTHFSNP
ALQLSGINHGPPFGGNMRQFPTGSPLNQIMQNQLVNQAGLYPGDHPNISSGLPMINKYDQ
MLGLMELRDQMPKSAQIGRPNLRFSPQGFDTSGLRSNSGWPRFRSKYMTTDEIENILRMQ
LAATHSNDPYVDDYYHQGCLAKKSSGAKLRHHFSPAQIRELPLRPSSNTEPHAFLQVDAL
GRVPFSSIRRPRPLLEVDPPNSSNVGSPEQSISEKPLEQEPMLAARVTIEDGIYLLLDVD
DIDRFLRFNQLQDGGLQLKRKRQGLLEGLAASLQLVDPLGKNGRTVTLAAKDDFVFLRIV
SLPKGRKLLARYLQLLFPGGDLMRVVCMAIFRHLRFLFGNLSSDPASADTINNLARVVSR
CIREMDLSAISACLAAAVCISDPPPLRPLGSSAGDGASLILVSVLERATELLTDPHAASN
YNIANRSLWQATFDEFFGLLTKYCVSKYDGVMQSFLIQGTPNMAAIGADAAKAISKEMPV
ELLRASLPHTNDHQKKLLLDFAQRSIPVVGFNGNSGGHGHHVNSESVLS
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atggtggatatggatgggtttggaactgggggtgatgttgggggagttcccaacacagag
gatcttaggcaactggggaatgtttccacagaaggtgctgtttttgatgcatcacaatat
gctttttttggttcggatagtgctgtccaagaagttgagctgggagggttagaagatgat
gatgatttgattgagtctaatggggaattcattgtcaacagagaagaggctgaggattta
aaatctctctctgacattgatgatctcagtactacattttggaagttgaacaaggttgta
agtggaccaaaaagcacagaatatattggtgaacagggatcgagacaaaattctgcagct
gaatgggcacagaaggacgatgttcttaactggtatgaacagaatgcttatgataatgag
ggttctctggatggaagaagaatgtcatcgcaacctcattcttctctctctcagttacat
gaaccaaaggccttgtacagaacatcctcgtatcctgagcagcctaggcagcaacaacat
caccagctccaacctggtgagtcggctcccaactggtttgatcagcatatgtatggtact
gaaactactcacgatggaaaacggtggtcatcacaaccacattccacaattgctcactta
caagaaacaaggccattgcatagaacatctttatatcctgataagcagccggaatttcct
catttttctagtgaaccaattttggtaccgaactcttcatttacttcttatcctccgcca
agtggtagatctcagcaggcttctccaagtcataatacagggcatttaaacattccttat
catgctatgggaggtcagatggcactatcacctcaaaatcgtactcatttctccaatcct
gcattacagttgagtggaataaatcatgggccgccttttggtggaaacatgcgccaattt
cctactggttctcctcttaatcagataatgcagaatcaattggtaaaccaggctgggtta
tatcctggagatcatcccaatatttcctcaggtttaccaatgattaacaagtatgatcag
atgctcggactgatggaactgagggaccaaatgccaaaatcagctcaaataggtaggccg
aatctccggttttcccctcagggttttgatacaagtggccttagaagcaatagtggatgg
cctagatttagatccaagtatatgactactgatgaaattgagaatattcttagaatgcag
cttgcggcaacacatagcaatgatccatatgttgatgattattaccaccaaggctgtctt
gcaaaaaagtcttctggtgctaaattgaggcaccactttagtccagctcaaataagggaa
cttcctctacgaccctcttctaatactgaaccacatgcttttcttcaggttgatgctcta
ggaagggttccattctcatcgattcgcaggccccgccctctactggaagttgatcctcca
aattcctctaatgtaggtagccctgagcaaagcatttcagagaaaccccttgaacaggaa
ccaatgcttgcagctagggtcacaattgaagatggtatttatcttcttcttgatgtagat
gatattgatcgtttcctacgttttaatcagctccaagatggtggtcttcagttaaaacgg
aaacggcagggtcttttggaaggacttgctgcctctcttcagttagttgatccactggga
aagaatgggcgtacagttacacttgctgccaaagatgactttgtttttctcaggatagtt
tctctacccaagggtagaaagcttcttgctaggtacctacaactgctttttcctggtggt
gatctaatgcgggtagtctgcatggccatctttcggcatttaaggtttttatttggtaat
ctttcctctgatccagcttcagcagacactattaataaccttgcaagggttgtttcaaga
tgcatccgtgaaatggatctaagtgccattagtgcttgtctagcagcagctgtttgtatt
tctgatccaccgcccctacgtccccttggaagttcagctggagatggggcttcccttatt
ctagtatccgtacttgaaagggcaactgaacttctaactgatcctcatgctgctagcaat
tataatattgcaaaccgttcactttggcaggctacatttgatgaattctttggccttctg
accaagtattgtgtgagtaaatatgatggtgtaatgcaatcattccttatacaagggaca
ccaaatatggctgccattggtgcagatgctgctaaagctattagcaaggaaatgccagtt
gagctattacgtgcaagtttacctcacaccaatgatcaccagaaaaaactattacttgat
tttgctcagcgctctatacctgttgttggatttaatggtaattcagggggccatggtcac
catgtgaactcggagtcagtgctgagttaa
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