Vigna radiata (mung bean): 106775816
Help
Entry
106775816 CDS
T04126
Name
(RefSeq) regulator of nonsense transcripts UPF3 isoform X1
KO
K14328
regulator of nonsense transcripts 3
Organism
vra
Vigna radiata (mung bean)
Pathway
vra03013
Nucleocytoplasmic transport
vra03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
vra00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106775816
03015 mRNA surveillance pathway
106775816
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vra03019
]
106775816
Messenger RNA biogenesis [BR:
vra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
106775816
mRNA cycle factors
P-body specific factors
106775816
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
RRM_2
Motif
Other DBs
NCBI-GeneID:
106775816
NCBI-ProteinID:
XP_014518504
UniProt:
A0A1S3VK86
LinkDB
All DBs
Position
10:complement(20812293..20820767)
Genome browser
AA seq
512 aa
AA seq
DB search
MKGALDRTKAVLRHLPPSLSEAALLAQIDAAFADRYNWFSFLPGKISQKHISYSRAYIDF
KRPDDVILFAEFFNGHVFVNEKGSQFKVIVEYAPSQRVPRQWSKKDGRDGTIYRDSEYLE
FLELLSKPVENLPSAEIQLEKREAERSGAAKDIPISTPLMDFVRQKRAAKGPRRSLSNGK
VSRRGTSSNGSPSSGTSRRGSGKKRVSATMYVARHPGKNATMKDRSIYTLAPSQGDQHIS
SKASNVASSDGKQTLDENGVSGNNDAGKKKVLLLKGKEREIIAVSDLDSMSQHHNVTSSA
KEIVGATVLKQNQRHEGSGRIIRSILSKKELRQSQSSRALSEHQIQTSNLEKEKQSPRPV
HVQLILKGMNGTSENKIGLHDSHASSERQERHTRHKDRPDRGVWTSSNVADESVSSAASS
QVDPVEGRNADLKHDMPNARSGEVKSLGGVRTSHSSENGFNKHFGRRGPTHGLKDVDSYS
VSSEGKHPRRSGTTTYGSNEKQVWVQKASSGT
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgaagggtgcgttggatcggacgaaggcggtgctgcgtcacttgccgccctctctttcc
gaggccgcacttttggcccaaattgatgccgccttcgctgaccgctacaactggttctct
ttccttcctggcaaaatcagccagaaacatatatcatattctagagcctacatcgacttc
aagaggccagatgacgttatactgtttgcagagttcttcaatggacacgtctttgtgaat
gaaaagggatctcagttcaaagttattgttgaatatgctccttcccaacgcgttccaaga
cagtggtctaaaaaggatggtcgtgatgggaccatatatagagattctgagtatctggag
tttcttgaactactttccaagcctgttgagaatcttcccagcgctgagatacaattggag
aagagagaagcagaacgatctggtgctgcaaaagatattcctataagtacaccactgatg
gattttgtgcgccagaaaagagctgccaagggacctcggaggtcgttatccaatggcaaa
gtgagtagaagaggcacttcatcaaatgggagtcctagttctggcacatcaagacgaggt
tcaggaaagaagagggtttctgctactatgtatgttgccaggcacccagggaaaaatgct
actatgaaagacagatcgatttatactttggctcctagccaaggtgatcagcatatttca
agtaaagcttcaaacgtggcctcttcagatggaaaacaaacccttgatgagaatggagtt
tctggaaataatgatgctggaaaaaaaaaagtactgcttcttaaagggaaagaaagagaa
attattgctgtatccgatttagatagcatgtcacagcatcacaatgtaacatcttcagcc
aaagaaattgttggtgcaacagttttgaagcagaatcagaggcatgaaggtagtggaagg
attataagaagcatactttcaaaaaaggagttgcgtcaaagccaatcttccagggcactc
tctgagcatcaaatccaaacatctaatctagaaaaagaaaaacaatcccctcggcccgta
catgtgcaactaattctgaagggcatgaatggtacatcagagaataagattggtctgcat
gattcacatgcatctagcgagaggcaggagagacatactagacataaagatagaccagat
cgtggtgtttggacaagttccaatgttgctgatgagtctgtctcatctgctgcttcctca
caagtagatcctgttgaaggaagaaatgctgatttaaaacatgacatgccaaatgcaaga
agtggggaggtaaaatctcttggaggtgtccgtaccagtcattcatcagaaaatggcttc
aataagcattttggtcgccgtggaccaacacatgggttaaaggatgttgatagctattca
gtttcaagtgaagggaagcatcctagaagatctggtaccactacttatggttccaacgag
aaacaagtttgggttcaaaaagcgagttctggtacctag
DBGET
integrated database retrieval system