Vigna radiata (mung bean): 106779638
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Entry
106779638 CDS
T04126
Name
(RefSeq) regulator of nonsense transcripts UPF3-like
KO
K14328
regulator of nonsense transcripts 3
Organism
vra
Vigna radiata (mung bean)
Pathway
vra03013
Nucleocytoplasmic transport
vra03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
vra00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106779638
03015 mRNA surveillance pathway
106779638
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vra03019
]
106779638
Messenger RNA biogenesis [BR:
vra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
106779638
mRNA cycle factors
P-body specific factors
106779638
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
SRP-alpha_N
RRM_2
Motif
Other DBs
NCBI-GeneID:
106779638
NCBI-ProteinID:
XP_014523278
UniProt:
A0A1S3VY39
LinkDB
All DBs
Position
Unknown
AA seq
538 aa
AA seq
DB search
MMEERKMKVRSEREKTKVVIRHLPPSLTQSDLFHHIDSHFASRYNWFSFRPGNTSHKRQR
HSRAYIDFNSPHDVFDFAEFFDGHVFVNERGAQHKAIVEYAPSQRVPKPTTKKXGREGTI
YKDPDYLEFLKLIAKPHEHLPXAEIQLERKEAEQAGANKETPIVTPLMEYVRQKRAADTG
MQASSAVAKVSRRSRAALXGKPGSGNTKRGSEKKKYVQKDNXKSAARKESKDKSSFIVVP
RQEDLSAESSMKGISEIEALHGIEGSIXGIPLSSDSGKKKVLLLKGKQREIPSATEXTIK
QQXLQSGNSPISTHAKQNQRRENSGRLIRSILLNNEARQSQSPTGTQHKIQILSXENGKR
PPXPFGSRSGLNDQHSYHDTAQVNSEGDSKSALDEKFVKRDPHGLGSGEKTEKRTRSKDR
PDRGVWTPLRRSDVSHAGSDYSSSMAQPTLSNPESAEGEVKENVTSWNRGSEISASAGGR
GNPSIENGSQRNFARRGASYVVKDDGAVSISEGKHSKKSVGHSAHEKQVWVQKSSSGS
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgatggaagaaaggaagatgaaggttcggtcggaaagggagaagacgaaagtggtgatt
aggcatttgcctccttctctcactcaatccgatctcttccaccacatcgattcgcacttc
gcttcacgttacaattggttctctttcagacccggcaacaccagccacaagcgtcagagg
cattcccgagcctatatagacttcaattctcctcatgatgttttcgacttcgctgagttc
ttcgatggacatgtttttgttaacgagagaggtgcccaacataaagcgattgttgagtac
gccccttcccagcgtgttccaaagccaactaccaagaagganggacgtgaagggaccatc
tataaagatccagactatctggagttcctcaaactcattgcaaagccacatgagcatctt
cccantgcagagatacaattggaaagaaaagaagctgaacaagctggggctaacaaggaa
acacctattgtcactcccttgatggaatatgttcgacagaaacgtgctgctgacactggt
atgcaggcctcatcagcggtggcaaaagttagcagaagatccagagctgctttgcntggc
aagcctggctcgggcaatactaaacgaggatctgaaaagaagaagtatgttcagaaggac
aatnccaagagtgctgctcgcaaagagtcaaaagacaagtcatcctttattgtggttccc
cggcaagaggatctatcagctgaatcaagtatgaaaggaatttctgaaattgaagcattg
catggcattgaaggttccatttntggaattccactgtcttctgactctggaaagaaaaaa
gtccttcttctaaaagggaaacagcgggaaattcccagtgccactgaggntacaataaaa
cagcaaancctacaatctggaaattctcctatttcaactcatgcaaaacagaaccagaga
cgggaaaatagtggaagattgatcaggagcatacttctaaataatgaagctcgtcaaagt
cagtctcctactgggacgcaacataaaattcaaattttaagctnagagaatgggaagcga
ccacctcntccttttggttcaaggtccgggttaaatgatcaacattcatatcacgatact
gcacaagttaattctgaaggggattctaagagtgctttggatgaaaaattcgtaaaaagg
gatccacatggtttgggtagtggtgagaaaacagaaaaacgtactagaagcaaggataga
cctgatcgtggtgtttggacaccccttcgtcgttctgatgtttcacatgctggtagtgac
tactcatcttcaatggcacaacctactctgtcaaatcctgaatccgctgaaggagaagta
aaagaaaacgttacttcttggaacaggggcagtgaaatctctgcttctgcaggtggacgc
ggcaatccttctattgagaatggttcccaaagaaattttgcacgtcgtggagcttcctat
gtagtgaaggatgatggtgcagtcagtataagtgaagggaaacattcaaagaaaagtgtt
gggcacagtgctcatgagaagcaagtctgggttcagaaatcttcttcagggtcttaa
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