KEGG   Vitis riparia (riverbank grape): 117907000
Entry
117907000         CDS       T07274                                 
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase FANCM isoform X1
  KO
K10896  fanconi anemia group M protein
Organism
vri  Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:vri00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vri03400]
    117907000
DNA repair and recombination proteins [BR:vri03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    FA core complex
     117907000
SSDB
Motif
Pfam: DEAD Helicase_C ResIII Spt5_N
Other DBs
NCBI-GeneID: 117907000
NCBI-ProteinID: XP_034676195
LinkDB
Position
18:complement(25840856..25878787)
AA seq 1413 aa
MASTTPHLITVDDDDEFDWEAAFREIDVACQTTKPSISCSDNNKPKLSKQSTLDRFISPA
GAVPPLENGDTLDRDKSNLVGDEGLCCIDVDAEAAKTWIYPVNVPMRKYQLSITKTALFS
NTLVALPTGLGKTLIAAVVMYNYFRWFPEGKIVFAAPSRPLVMQQIEACHNIVGIPQEWT
IDMTGQTSPTRRAGLWKAKRVFFVTPQVLEKDIQSGICLVKYLVCLVIDEAHRALGNYSY
CTAVRELMAAPVQLRILALTATPGSKQQSIQNIIDNLHISTLEYRNESDHDVSPYVHNRN
VELIEVAMGQDAIEINNVLLEVIRPFVIRLCAVGVLQNRDLQTLSPCDLLNSRDKFRQAP
PLALPHMKYGEVEGYFGALITLYHIRKLLSSHGIRPAHEMLEEKMQQGPFARLMSKNEVL
WKAKCLMQQSLSNGTPNPKLSKMLDILIDHFKANNPQNSRVIIFSNFRGSVRDIMDALAK
IGESVKATQFIGQSSGKASKGQSQKVQQAVLEKFRAGGFNVIIATSIGEEGLDIMEVDLV
ICFDANISPLRMIQRMGRTGRKHDGRVVVLACEGSEMKGYMRKQANSKTVRKHMRNGGMN
SFNFHSSPRMIPHIFKPEVQFVELSIEQFVPRGRKGKDDHPIQAPISTDKLTNVETEVLA
KYFGTTGKITWRPSLIAFPPFQAFPTGVHKIPHSFRTEILIDMMQHLQGLSFSGNSKTFF
VEGEVSTNEHLGVETVEQYDKSRVGNITFNNSNGLCNKPCVFRKDEASMDEHLAVETVEQ
HEESRKDSIIFGDSPKAQPIRELSYSEESPIRNTKTKEKHSMSSSQGNNPHVHSYLFGSD
FVSVDTLGNVLILSVPLIPSKEVSHSKCASASSSMLLNCLKQDSCHSGTSQGQHKGQSME
EKAVANLRTSGQARCTMDETLLISKLHNSLGQQEKKLDGVEEIVQTPILKGSLSHEGDTA
VETLVANKTPIFLAAESSDDIGDTDLSPRLTNLIKSGVVPESPINESGPSNGRPRNEFLV
PDLVSPAKVLSEMLLTGKNEKVTLDVSTSGQDTLNSPISNGMHSPILKPDISAKARGSNP
SSPIVEEVKTPLANLTNNSCSKDWHLSSGDKSASVKQERKFKRLRKYGDTGQRRNMKSMK
ENSIDPSGNLAETSSIIPIRNKHNRGKQKPVDNVRAFIEEEAEVSSEAEVSDDEEDDQNN
NSYDDSFIDDRIDPTATSTQAEDSRSDMMAIYRRSLLSQSPVVRQPNFSADFSPCTLAPM
TRITETGSSLSKTTYSLNQSSERNTVSIQINPEIISSEAIPWTSVSPRENERELESRKRK
LGIYQGGSVPVINLERQFQLEAASKESSLQHQAEKIETIGDVFYDDQFYEGLDLDAVEAQ
ATMLLRHKSELFTQKQDPQSLDLFGSPTFDLGI
NT seq 4242 nt   +upstreamnt  +downstreamnt
atggcttcaacaactcctcacctcattactgtcgacgatgacgacgagttcgattgggaa
gcagcttttagagagatagatgtggcttgccaaaccacgaaaccctcgatttcatgctcg
gacaacaacaaacccaagctctctaagcaatctactctcgatagattcatcagccccgcc
ggcgctgtaccgccattggagaatggggatacattagatagagataaaagtaacttggtt
ggtgatgaagggctgtgctgcattgacgttgatgctgaggcagccaaaacttggatatat
ccagttaatgttcctatgcgtaaatatcagttatctataaccaagacagctctattttca
aatacattggtggcgttgccaactggtcttggcaaaacccttattgctgctgttgttatg
tacaactatttcagatggtttcctgaagggaagatagtttttgcagctccttctcggccg
cttgtcatgcaacaaatagaagcatgccataatatagtaggaataccacaagagtggacc
attgatatgacaggtcaaacaagtcctacaaggagagctggcctctggaaagctaaacga
gttttctttgttacacctcaagtgttggagaaggatattcaatctggtatatgtctggta
aaatacttggtgtgtttggtgattgatgaggctcatcgagctttgggaaattattcctat
tgcacagcagttcgtgagttgatggcggcaccagtgcagctgagaatcttagctttgaca
gcaacaccaggatcaaagcagcaatctatccagaatataattgataatttgcatatatcg
acgcttgagtatcgtaatgaaagtgatcatgatgtcagcccatatgtgcataacaggaat
gttgaattaatagaggttgcgatgggccaagatgctattgagataaacaatgtgctatta
gaagtaatacgaccatttgtgattaggctttgtgcagttggagtgcttcagaatagagac
ttgcaaactttgagcccatgtgatttgcttaattcaagggataaatttcgtcaagcaccg
ccactagcccttcctcacatgaagtatggggaagtagaaggttattttggagctcttatt
acactttaccatattcgtaagttactttccagtcatggaataaggccagcccacgagatg
ctcgaagaaaaaatgcaacaagggccttttgcaagacttatgagtaaaaatgaagttctt
tggaaagccaagtgcttaatgcagcaaagcttgtctaacggcaccccaaatccaaaattg
tctaaaatgttagacatattgattgatcatttcaaagcaaacaatccacaaaattcaaga
gtaatcattttttcaaattttagggggagtgtcagggacataatggatgcattagcaaag
attggggagtcagttaaagctacccagtttattggccaaagctcaggaaaagcatcaaaa
ggtcagtcacaaaaagttcagcaggcagttttggagaaatttcgcgctggtggattcaat
gtcattattgccacgtcaattggtgaagaaggcctggatatcatggaagttgatcttgta
atatgttttgatgctaatatctcaccgttgcgaatgattcaacgcatggggaggactgga
aggaaacatgatggacgagttgtagttttagcctgtgaagggtcagaaatgaagggttac
atgcgaaagcaagcaaacagcaagactgtaaggaaacacatgcgaaatggggggatgaat
agttttaatttccattctagtccaagaatgattccccacattttcaaacctgaagttcag
tttgttgagctatcaattgaacagtttgttcctcgtggaaggaaaggaaaagatgatcat
cctatccaggcacctatttctacagacaagctaaccaatgttgagactgaagttcttgca
aagtattttggcactaccggaaagataacatggcgaccatctcttattgcttttccaccc
tttcaggcatttcccactggagtgcataaaataccacattcattcagaacagagattctg
attgacatgatgcaacatttgcaaggtctatcattttcaggaaacagcaaaacattcttt
gttgagggtgaagtctccacaaatgagcatctgggagttgaaactgttgaacagtatgac
aaaagtagagtgggcaacatcaccttcaacaactcaaatggcttgtgcaacaaaccttgt
gttttcagaaaagatgaagcctctatggatgagcatttggcagtagaaactgttgaacag
catgaggaaagtagaaaagattcaattatttttggtgattccccaaaagcgcaaccaata
agagaattgtcttattctgaagaatcacctataaggaacacaaaaaccaaggagaagcat
agcatgtctagttcccaaggcaacaatcctcatgtgcattcctatctatttgggtccgat
tttgtatctgttgacactcttggaaatgtcttaattttatctgttcccttaattccttca
aaggaagtttcacattctaagtgtgcaagtgcaagcagtagtatgttgctaaattgtttg
aagcaagattcttgtcatagtgggacttcacagggacagcacaaaggacaaagtatggaa
gaaaaagccgttgcaaacttgaggacttctggccaggcaagatgcacaatggacgagact
ctgctaatatccaaattacacaactctctcggccagcaagagaaaaaactggatggggtt
gaggagattgttcagactccaattttgaagggaagtctgtcacatgaaggagatactgct
gttgagactcttgtggcaaacaaaacaccaatatttctagctgctgagtccagtgatgat
attggagacactgaccttagtccacggttaactaatttgatcaaaagcggcgttgttcca
gagtctcctataaatgaaagtgggccatcaaatggaagaccaagaaatgagtttcttgtt
ccagatcttgtttcacctgccaaagtactttctgaaatgttactgactggaaagaatgaa
aaggtcactttggatgttagtacctctggacaagataccttgaattctccaattagtaat
ggaatgcactctcctatactcaagccagacattagtgccaaagcaagaggaagcaatccc
tcttctccaattgttgaggaagtcaaaactcccttggcaaatctgacaaacaatagttgt
agcaaagactggcatctaagctctggagacaagtcagcaagtgtcaagcaggaaaggaag
tttaaaaggttgcgcaaatatggggacactggccaaaggaggaatatgaagagcatgaaa
gaaaattctattgacccttcaggaaaccttgccgaaacttctagtattattcctatcaga
aataagcataacagaggtaaacaaaagccagttgacaatgtcagagcatttattgaagag
gaagctgaggtatcttcagaagctgaagtatctgatgatgaggaagatgaccagaacaac
aattcatatgatgatagtttcatagatgacagaatagatcctacagcaacaagtactcaa
gctgaagatagtagaagtgacatgatggcaatttacaggcgttctttactcagtcaatca
ccagttgtgaggcagccaaacttttctgctgattttagtccttgcactctggctcccatg
accaggataactgaaactggaagctctttgagcaagacaacatattctctaaatcagtct
tcagagaggaatacggtttccattcaaatcaacccagaaataatctcctcagaagcaata
ccatggactagtgtttccccaagagaaaatgagagagagttggaaagtcggaaaagaaaa
ttgggcatttatcaaggtggatctgttcctgtaatcaacttagagcgacaatttcagttg
gaggctgccagcaaagaatcatccttgcaacatcaagctgagaaaatcgaaacaattgga
gatgtgttctatgatgatcaattttatgaggggcttgaccttgatgcagtggaagctcaa
gctaccatgctactcagacacaaatcagagttgttcacacagaagcaagacccacaaagt
ctggatctttttggttctccaacatttgatcttgggatttaa

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