Vitis riparia (riverbank grape): 117907555
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Entry
117907555 CDS
T07274
Name
(RefSeq) ABC transporter B family member 13-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
117907555
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vri02000
]
117907555
04147 Exosome [BR:
vri04147
]
117907555
04090 CD molecules [BR:
vri04090
]
117907555
Enzymes [BR:
vri01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
117907555
Transporters [BR:
vri02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
117907555
Exosome [BR:
vri04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
117907555
CD molecules [BR:
vri04090
]
Proteins
117907555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_16
AAA_22
ABC_ATPase
Zeta_toxin
RsgA_GTPase
DUF87
AAA_21
AAA_23
P-loop_TraG
AAA_30
Motif
Other DBs
NCBI-GeneID:
117907555
NCBI-ProteinID:
XP_034677028
LinkDB
All DBs
Position
18:12948023..12953876
Genome browser
AA seq
1254 aa
AA seq
DB search
MEGLELRSIQISDQNPLPEKDQQSNSSPKDTVSFFGLFAAADTLDCFFMFFGSIGACIHG
AALPVFFVLFGRMIDSLGRLSSDPDKLSSQVSRHALYLVYLGLGVLASAWIGVAFWMQTG
ERQTARLRLKYLQSVLRQDINFFDTEARDKNITFHISNDAILLQDAIGDKIGHGLRYLSQ
FFVGFAIGFTSVWQLTLLTVAVVPLMAIAGGAYTVIMTTLSEKGEAAYAEAGKVAEEAIS
QVRTVYSFVGEDRAVETYSRSLQKALKLGKKSGFAKGIGIGFTYGLLFCAWALLLWYASK
LVRHGDTNGGKAFTTILNVIFSGFALGQAAPNLAAIAKGRAAAANIVNMIETDSTASKRL
DNGIMLPKVAGQLEFCEVCFAYTSRPSMVFENLSFSIYAGKTFAVVGPSGSGKSTIISMV
QRFYEPTSGKILLDGHDIKNLRLKWLRAQMGLVSQEPALFATTIAGNILYGKEDADMDQV
IEAAKAANAHSFVQGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRNPKILLLDEATSA
LDAESELIVQKALDKIMLNRTTIVVAHRLSTIRDVNKIIVLKNGQVVESGTHLELISQGG
EYATLVSLQVSEHGKSPSTKVCQDTSGISKSFPESPNSQNHQQEVKSITKGELQPYDQNM
ASSSSPPIPSLWQLVKLNAPEWPFAVLGSVGAILAGMEAPLFALGITHVLTAFYSGKDFQ
IKREVDHISLIFVGAGILTIFIYLLQHYFYTLMGERLTTRIRLLMFSAILSNEIGWFDLD
ENSTGSLTSKLAADATLVRSALADRLSTIVQNVALTVTAFVIAFTLSWRIASVIIASFPL
LIGASITEQLFLKGFGGDYTRAYAQATAVAREAIANIRTVAAFGAEDRISLQFASELNQP
NKQALLRGHISGFGYGVSQLFAFCSYALGLWYASVLIKHKDSNFGDIIKSFMVLIITAFS
VAETLALTPDIVKGSQALGSVFSILQRKTAINRDNPTSSVVTDIQGDIEFRNVSFRYPAR
PDLTIFKDLNLKISAGKSLAIVGQSGSGKSTVISLVMRFYDPTSGAVMIDGFDIKGLNLR
SLRMKIGLVQQEPALFSTTIYENIRYGNEEASEIEILKAARAANAHGFISRMPEGYQTQV
GDRGVQLSGGQKQRVAIARAILKDPSILLLDEATSALDTASEKLVQEALDTLMEGRTTIL
IAHRLSTIHNADSIAVLQHGKVVETGDHRQLITRPGSIYKQLVSLQQEKGEVPN
NT seq
3765 nt
NT seq
+upstream
nt +downstream
nt
atggaaggactagaacttcgctccattcagatttccgatcagaacccacttccagagaag
gatcagcaatccaactcaagtccaaaagacactgtttccttcttcggcctatttgcagct
gctgatacattggactgtttttttatgttctttggtagcattggggcttgcatccatggt
gctgcacttcctgtgttctttgttttgtttggccgaatgattgattctttgggacgccta
tcttcagatccagataaactttcctctcaagtttccaggcatgctctatacttggtctat
cttggacttggggttttagcatcagcatggatcggtgttgcattttggatgcaaacaggg
gaaaggcagacggcccgtttgcgactcaagtatcttcagtcagtcttaagacaggatatt
aatttctttgacactgaggccagggataaaaatatcactttccacatttcaaatgatgca
attctgttgcaggatgcaattggtgacaagataggccatggtttacgttacctttctcaa
ttctttgttggatttgcaataggattcacatcagtatggcagcttacacttctcaccgtg
gctgttgttccattaatggctattgctggaggagcctatacagtaataatgaccaccttg
tcagaaaaaggtgaggctgcctatgctgaagctgggaaggttgcagaagaggctatttca
caggttcgtactgtatactcatttgtgggagaggatagagcagttgaaacatattcaagg
tcacttcaaaaagcccttaaactggggaaaaagagtgggtttgcaaagggaattggtatt
ggctttacatatgggcttttgttttgtgcttgggcattacttctctggtatgccagcaaa
ctagtcaggcatggggacacaaatggggggaaagcattcactacaattctcaacgtcata
ttcagtggatttgctcttggtcaagctgcccctaatcttgctgccattgctaaaggccgg
gctgctgcagccaatatagtaaacatgattgaaacagattctactgcttctaaaaggtta
gataatggaataatgttgccaaaagtagctggacagcttgaattttgtgaggtctgtttt
gcttatacctcacgacctagtatggtcttcgaaaatttgagcttttctatttatgctggg
aagacctttgctgttgttgggccaagtggttcaggaaagagcaccattatttccatggtt
caacgtttctatgagcccacttcaggtaaaatactgttggatggacatgatattaagaat
ctccgattaaaatggctgagagcacagatggggttggttagtcaagaacctgcattgttt
gccacgactatagctgggaacattctgtatggaaaagaagatgctgatatggatcaggtc
atagaagctgccaaagctgcaaatgcacattcttttgttcaaggcttacctgatggttat
caaactcaggtaggagagggaggaactcagctttctggagggcagaaacagagaattgca
attgcaagagcagtgctgaggaacccaaagatactgctgttagatgaggccactagtgct
cttgatgcagaatcggaactcattgttcagaaggcactagataaaatcatgttgaatcga
acaacaatcgttgttgcacacagattatccacaattcgagacgttaataaaatcattgtt
ttgaagaatggccaggttgttgaaagtgggactcatttggaattgatttcccaggggggg
gagtatgcaactttagtgagcttacaagtatcagaacatggtaaaagtccaagtacaaag
gtttgtcaagacacttctgggatttctaaaagttttccagaatcccccaacagtcagaac
caccaacaggaggttaagtcaattaccaaaggagagctacagccatatgatcagaacatg
gcctcttccagctctcctccaattccatcactttggcaactagttaaactaaatgcacca
gagtggccctttgctgtgcttggatcagtgggcgcaattctggctgggatggaagctcct
ctgtttgcccttgggatcacacatgtcttgactgcattctattctggcaaagatttccag
attaagcgagaggttgaccacatttctctcatatttgttggagcgggcattcttactatt
ttcatatatctattgcaacactatttctatacattgatgggcgagcgtctcaccactcgc
attcggttattaatgttctcagcaatcctttccaatgagataggctggtttgatttggat
gagaacagtactggctctttgacatcaaaattagcggcagatgcgacattagtaagaagc
gcacttgccgaccgcctctcaaccattgtgcagaatgttgctctcactgtgacagcattt
gttattgccttcacattaagttggcgtatagcatctgttatcattgcctccttccctctt
ctaattggagcttccataactgagcaactatttcttaagggttttggaggagactacaca
cgggcctacgctcaagcaactgctgtggcacgagaagcaattgccaatattcgtaccgtt
gctgcatttggtgctgaagaccgaatctcactccagtttgcttctgaactgaaccaacca
aacaaacaagcacttttacgtggccatatatcaggttttggatatggtgtatcacagctc
tttgcattctgttcctatgcacttggcctttggtatgcatcagttcttatcaaacacaaa
gactcaaactttggagacatcatcaagtccttcatggttttgataatcactgcattttca
gtggcagagacacttgctctaacacctgacattgtaaagggatcacaagcacttggatca
gtcttcagtattctccaaagaaaaacagccattaaccgtgacaatcctacatcttcagtg
gtaactgatatccagggagacatagagttcaggaatgtgagtttcagataccccgcaagg
cctgatctcaccatcttcaaggacttaaatttgaaaatctcagcaggaaagagtcttgca
atagtgggccaaagtgggtcagggaagagtactgtgatctcactggttatgagattttac
gacccaacttcaggggcagtcatgattgatggatttgatatcaaaggcttaaacttaaga
tcgttgaggatgaaaataggtttagttcagcaagaaccagcattgttctctaccacaatt
tacgagaacatcaggtatgggaatgaagaggcatcggaaattgagatactgaaagcagcc
agggcagcaaatgctcacggcttcatcagcagaatgcctgaagggtaccaaactcaagtg
ggtgacagaggagttcagttatcagggggacagaagcagagggtggccatagctagagca
atattgaaagacccatccattctccttttagatgaagcaacaagtgccctggacacagca
tccgaaaagctggttcaagaggctcttgatacactaatggaaggccgaacaacaattttg
atagcacacaggttgtcaactatacacaatgcagacagcattgcggtactgcaacatggt
aaggtagttgaaaccggagaccaccggcagctcatcacccggcctggcagcatctataag
cagttagttagcctacaacaggaaaaaggtgaagttcccaattga
DBGET
integrated database retrieval system
