Vitis riparia (riverbank grape): 117911774
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Entry
117911774 CDS
T07274
Name
(RefSeq) probable E3 ubiquitin-protein ligase ZFP1
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vri04121
]
117911774
Enzymes [BR:
vri01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117911774
Ubiquitin system [BR:
vri04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117911774
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4
zf-RING_5
zf-RING_11
zf-C3HC4_2
zf-C3HC4_3
zf-RING_UBOX
zf-C3H2C3
zf-ANAPC11
zf-RING_16
zf-RING_4
Mito_fiss_reg
Motif
Other DBs
NCBI-GeneID:
117911774
NCBI-ProteinID:
XP_034682088
LinkDB
All DBs
Position
3:complement(8561831..8563293)
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AA seq
461 aa
AA seq
DB search
MFSAPENSSHFDAPHLPQHYDASAMFYGIRLHHPLPSLDIAVAPPSNIYDPYSTPSSGYR
GFPVSMNHGPSGHLPSSSNHGVIGVSTYDRKNSQGILGNFQYFNGFASSSSSAPPFNTRH
LEFGVPVMDSASFAFAQPQYRGNNAPSIMEVGSHRSVRNRSGAVGLDSVLAHNHYHLVQG
NYIGHPFQPSGNPWVDQQSGNNGSGGGTLAWNHGPALPYSHGSNISGGSTEAGNVGIQGY
HDTSSARSSTDYLQPPVLHRHHNLHYPPPPPPPPPPMQGARRHFHPQVVASSYRLVTISS
RSPVTPQVGVEAGHRHPGPVPPTGIRIDRSHRGGVAPEATSRHGNLPYLRALPEEEVAIL
DLSASYQVGEVSTGLSEESITNCLKTRTYISSTCLNLEEGASMDEENDSCIICQEEYENE
EKIGYLDCGHEYHADCLKKWVLKNVCPLCRAPAMTPKKKDV
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgttttcagctccagagaattcaagtcattttgatgcgcctcatttacctcagcattat
gatgcctctgctatgttctatgggattcgccttcatcatccactccccagtcttgatatt
gctgttgctcctccatccaacatttatgatccttactcgaccccttcatctggatacaga
gggttccctgtttctatgaatcatggaccatctggtcatttgccatcttccagcaatcac
ggagtcattggagtctctacatatgatcgaaagaattctcaaggcatcctggggaatttt
cagtattttaacggctttgcaagctctagttcttcggctccccctttcaatacaaggcat
cttgaattcggggttcccgtgatggattctgcatcttttgcctttgcccagccgcagtac
agagggaataatgctccttcaatcatggaagtaggatctcacagaagtgtgaggaacaga
tcaggtgctgttgggctggattctgttctggcacataatcattaccatttggtgcaagga
aactatattggccatccttttcagccttctggcaatccctgggttgaccaacaatcaggc
aataatggtagtggtgggggaactttggcctggaatcatggacctgctttaccttattcg
catgggagcaacatcagtggaggttctacagaggctgggaatgtgggtatacagggatat
catgatacatctagtgccagaagttccacagattaccttcaacctcctgtccttcaccgg
caccataatcttcattatccaccaccaccaccaccgccaccaccacctatgcaaggagca
agaagacatttccaccctcaagtagtggcatcttcgtatagacttgtcacgattagttca
cgtagtcctgtgactcctcaggtcggtgtagaggcagggcacaggcatccaggacctgtt
ccacctactgggattagaatagaccgatctcatcgagggggagtcgcacctgaggcaaca
tcgagacatggtaatctgccttacttgagagcgctcccagaagaagaagttgccatacta
gatctttcagcatcttatcaagtaggggaagtaagcacagggctttcagaggaatccatt
acaaattgtctaaaaactagaacttatatatcttcaacttgtctgaatctggaagagggt
gcaagtatggatgaggaaaatgattcttgcattatatgccaggaggagtatgagaatgaa
gagaagattggatatcttgattgtgggcatgagtaccatgcagattgcttgaagaagtgg
gtgctgaagaatgtgtgccccctctgcagagccccagcaatgaccccaaaaaagaaggat
gtatag
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