Vitis riparia (riverbank grape): 117912943
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Entry
117912943 CDS
T07274
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 2
KO
K05610
ubiquitin carboxyl-terminal hydrolase L5 [EC:
3.4.19.12
]
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
117912943
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
vri01002
]
117912943
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vri04121
]
117912943
Enzymes [BR:
vri01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
117912943
Peptidases and inhibitors [BR:
vri01002
]
Cysteine peptidases
Family C12: ubiquitin C-terminal hydrolase family
117912943
Ubiquitin system [BR:
vri04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UCH
117912943
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C12
UCH_C
HAUS-augmin3
HTH_63
DUF1574
Motif
Other DBs
NCBI-GeneID:
117912943
NCBI-ProteinID:
XP_034683650
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All DBs
Position
4:24681381..24692909
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AA seq
334 aa
AA seq
DB search
MSWCTIESDPGVFTELIQQMQVKGVQVEELYSLDLDSLNHLRPVYGLIFLFKWRPGEKDD
RLVIKDPNPNLFFASQVINNACATQAILSILMNCPDVDIGPELSMLKEFTKNFPPELKGL
AINNSEAIRTAHNSFARPEPFVPEEQKAAGKDDDVYHFISYLPVDGILYELDGLKEGPIS
LGQCPGGQGDLDWVRMVQPVIQERIERYSRSEIRFNLMAIIKNRKDIYTGELKELQKRRE
HILHQLAALQSERMVDNSNIEALNKSLSEVNAGIEGATEKILMEEEKFKKWRTENIRRKH
NYIPFLFNFLKILAEKKQLKPLIEKAKQKTNNSR
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgtcttggtgcaccattgagtctgatcctggtgtctttacggaacttatacaacaaatg
caagtgaaaggtgtccaggttgaggagttgtattcattggaccttgattctctgaaccat
cttaggccagtatatggattgatttttcttttcaagtggcgtccaggggaaaaggatgac
cgtcttgtaatcaaggacccaaaccctaatttattttttgccagtcaggttattaacaac
gcatgtgcaacccaagcaatcttgtctattctcatgaattgtccagatgttgacattggt
ccagagttgtcgatgttaaaagaattcaccaagaacttcccccctgaactcaaagggttg
gctatcaataacagtgaagccatacgaacagcccataacagttttgcaagacctgagccc
tttgttccagaggagcagaaggctgctgggaaagatgatgatgtataccatttcataagc
tatctaccagttgatggcattctgtatgaattggatggattgaaggagggacccattagc
ctgggtcaatgccctggtggacaaggtgacttagattgggtgcgtatggtgcaaccagtg
attcaggaacgcattgaaagatattccagaagtgagatcagatttaacctcatggctatc
ataaagaataggaaagatatatatactggcgagctgaaagagctgcagaagaggagggaa
cacattttgcaccagttggcagccttacagtcagagagaatggtggataatagcaacatt
gaagctttaaataaatccttatcagaagtaaatgctggaattgagggtgctacagagaag
atattaatggaggaggaaaaattcaagaagtggagaacggaaaacatccgcaggaaacac
aactacattcccttcttatttaattttctcaagattcttgctgaaaagaagcagttgaaa
cctcttatagagaaagccaagcagaaaacaaacaacagtaggtga
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