Vitis riparia (riverbank grape): 117914306
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Entry
117914306 CDS
T07274
Name
(RefSeq) exopolygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri00040
Pentose and glucuronate interconversions
vri01100
Metabolic pathways
Module
vri_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
117914306
Enzymes [BR:
vri01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
117914306
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pectate_lyase_3
NosD
Beta_helix
Motif
Other DBs
NCBI-GeneID:
117914306
NCBI-ProteinID:
XP_034685480
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Position
1:326266..327763
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AA seq
396 aa
AA seq
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MGLQVTFTRIFLLMILFVWVRDAQGQLKVFNVMNYGAIANGQYDNSEALGRAWNEACHWK
GTGVVLIPRGTYMVHPVKFQGPCSGRTMFLNTGEVLAPTDPALIHADNWIAFQEIDGLRV
SGGGSFNGQGEKVWHDNDCHKNGDCKPLSSSLSFKFVTNGRIDHITSINSKMFHFNIYDN
QKIRINHVKILAPAESPNTDGIHIGRSNDIRITNSEIRTGDDCISLKQGSRDIHIQNVQC
GPGHGISVGSLGKDEGEEEVRGITVRNCTFQGSDNGLRIKTWAASTRNIASDFTFEDIVV
ENVRNPINIDQEYCPHPPCNEGESQVEIKNVKFRNIRGTSSTKVAVSLICSSRIPCSDIE
LHNIDLVYHDQGGPATSSCRHVNGVSSGVQRPPSCI
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgggcctgcaagtgacttttactagaatttttctgttgatgatcttgtttgtttgggtc
agagatgctcaaggtcaactgaaggtcttcaatgtgatgaactatggtgcaattgcaaat
ggacaatatgacaacagcgaggcattggggagagcatggaatgaggcgtgccattggaaa
ggaaccggtgtagtactgattccaaggggaacctacatggtgcaccctgtgaaattccag
ggtccatgcagtggtcgaaccatgttcctgaacacaggagaggtgctggctcctactgac
ccagctttaatccacgctgataattggattgcctttcaagaaattgatgggttgagggtc
agtggaggtgggtcatttaatggccagggagagaaggtttggcacgataacgattgccat
aagaacggcgactgcaaacccctttcctcatcattgtctttcaaatttgtcacaaatggc
aggattgatcacataacatcaatcaacagcaagatgttccatttcaatatatatgataac
cagaagataaggatcaaccacgttaaaatattggcccctgctgagagccccaacactgat
ggaatccatattggaagatcaaacgacatcagaattacaaattcagagatacgaaccgga
gatgactgcatatccttgaaacaaggcagtagagacatccacattcaaaacgttcaatgt
gggcctggccatggaattagtgttggaagtctaggcaaggacgagggggaagaagaagtc
aggggaataacagtaagaaactgcacctttcagggcagcgataacggtctgagaatcaaa
acttgggcggcctctaccagaaacattgcatcagacttcacatttgaagacattgtcgtc
gaaaatgtccgaaaccccatcaacatcgatcaagagtactgtccccaccctccttgcaat
gagggtgaatcacaagttgaaatcaaaaatgtgaaattcagaaacatccggggcacttca
agtacaaaagttgcagtgagcctcatctgcagcagtagaattccatgttccgacatcgag
ctccataacatcgacttagtgtaccatgaccagggaggacctgcaacttcaagctgtcga
catgtcaatggtgtttcttctggggtacaaagacctcccagctgcatatag
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