Vitis riparia (riverbank grape): 117914983
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Entry
117914983 CDS
T07274
Name
(RefSeq) ABC transporter B family member 11-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
117914983
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vri02000
]
117914983
04147 Exosome [BR:
vri04147
]
117914983
04090 CD molecules [BR:
vri04090
]
117914983
Enzymes [BR:
vri01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
117914983
Transporters [BR:
vri02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
117914983
Exosome [BR:
vri04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
117914983
CD molecules [BR:
vri04090
]
Proteins
117914983
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
ABC_ATPase
AAA_29
AAA_16
Zeta_toxin
RsgA_GTPase
AAA_15
AAA_5
AAA_30
AAA_25
AAA_7
DUF87
ATP-synt_ab
DUF6751
Motif
Other DBs
NCBI-GeneID:
117914983
NCBI-ProteinID:
XP_034686414
LinkDB
All DBs
Position
5:2240038..2244919
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AA seq
1202 aa
AA seq
DB search
MLVGTVTAVGNGMCLPAVAILFGELMDTFGKTVYTNNMLHEVSKLCLKFVYLSSGAAVAS
FFQVTCWMVTGERQATRIRSLYLKTILRQDIAFFDKETNTGEVVGRMSGDTVLIQDAMGE
KVGMVIQLAATFIGGFFVAFFKGWILVLVLLSCIPPLVASSAVMTILLAKLASQEQTSYS
VAASVVEQTIGSIRTVISFTGEKQAIAKYKKSLTKAYDSAVREGLATGLGLGSVMFIVFC
IFALAVWFGAKLIINKGYSGGNVVGVIVAVLTASMSLGQTSPCIKAFAAGQAAAFKMFET
INRKPEIDAYDTKGLKLDDISGDIELRDVYFSYPARPDEQIFSGFSISIPSGTTTALVGQ
SGSGKSTVVSLVERFYDPQAGEVLIDGINLKDFQLRWIRQKIGLVNQEPVLFASSIKDNI
AYGKDDATIEEIRAAAELANAAKFIHKLPQGLDTMVGEHGMHLSGGQKQRVAIARAILKD
PRILLLDEATSALDLGSERIVQEALDRVMMDRTTIIVAHRLSTVRNADMIAVIHQGKIVE
KGSHTELLRDPHGAYHQLVQLQEISSESEQHDESWESFGARHHNRFPFPFSFGVSPGINM
LETAPAKPNSEPLKHPTEGLVWRLACLNKPEIPVLLLGIVAAIVNGLILPAFAVLFSTII
DNFYDSADKLRKESKFWALMFFILGVASLLITPTRTYLFAVAGCKLIKRIRSMCFEKVVH
MEVGWFDKAENSSGAIGGRLSADAASVRSLVGDALALVVQNIATVIAGLAAAFEANWQLA
LIILVFLPLIGINGFIQLQFTKGFSGDAKKRYEEASQVANEAVGNIRTVASFCAEEKVMQ
LYQKKCEGPAKTGMTRGLISGLGFGLSFFFVYFIYAVTFYAGARLFRDGKTTFSKILRVF
FALSMVGLGVSQSGSYAPDASKAKSCAASIFAILDQISEIDSSGRSGKRLKNVKGDIKFR
HVSFRYPTRPEIQIFRDLCLTIRSGKTVALVGESGCGKSTVISLLQRFYDPDSGRITLDG
ADIQKLQLRWLRQQMGLVSQEPMLFNDTIRANIGYGKEGNATEAEIIAAAELANAHHFIS
SLQQGYDTAVGERGVQLSGGQKQRVAIARAVVKGPKILLLDEATSALDAESERVVQDALD
RIMVGKTTLVVAHRLSTIKGADLIAVVKNGLIAEKGNHESLMNIKNGRYASLVALHATAS
SQ
NT seq
3609 nt
NT seq
+upstream
nt +downstream
nt
atgctagtgggcacagtcactgctgttggaaatggtatgtgcttgcctgcagtggccata
ctctttggtgaattaatggacacattcggaaaaactgtctacaccaataatatgttgcat
gaagtttccaagctctgtctgaagtttgtgtatttgtcctcaggagcagctgttgcctca
tttttccaggtgacttgctggatggtaacaggagagagacaggccacaagaataagaagt
ttgtacttgaaaacgatattgaggcaagatattgccttctttgataaagaaaccaacact
ggagaagtcgttgggaggatgtcaggtgacactgttcttattcaagatgccatgggtgag
aaggttgggatggttattcagctggcagctacatttataggaggcttctttgtagctttt
ttcaaggggtggattcttgtccttgtcctgttatcttgtattccacctcttgttgcatct
agtgctgtcatgaccattcttttagcgaagctggcctcccaggaacaaacttcttattca
gtagcagcaagtgtagtagagcagactattggatcaataagaactgttatctcctttaca
ggggagaagcaagctatagctaaatacaagaagtctctaaccaaagcttatgattctgca
gtgagggagggcttggctactgggttaggtcttggttctgttatgtttattgtattttgc
attttcgctttagctgtatggtttggcgcgaagctgataatcaacaaaggatactcagga
gggaatgtcgttggggtgattgttgctgtgttgactgcttccatgtctctagggcagaca
tctccatgcattaaagcatttgcagcaggacaagctgcagcatttaagatgtttgagaca
atcaataggaagccagagatagatgcttatgacaccaagggactgaaattggatgatatt
agtggagatatcgaattaagggatgtttatttcagttatccagcaagaccagatgaacaa
attttcagtggattctctatctcaatacctagtggtacaacaacagctttggttggtcag
agtggaagtgggaaatcaacagtcgtcagtttagtagagagattctatgatcctcaagct
ggtgaagttcttatagatgggattaatctcaaggattttcaactgagatggatcaggcag
aaaataggccttgtcaaccaggaacctgtattgtttgcttctagcattaaagataatatt
gcctatgggaaggatgatgccaccattgaagaaattagagctgctgctgagctcgccaat
gctgctaaatttattcataaactgcctcagggcttagacacaatggttggcgagcatgga
atgcatctatctggaggccaaaagcagcgcgttgctatagccagagcaatcctgaaagac
ccgagaattctcctgctggatgaagctacaagtgctcttgatttgggatctgagaggatt
gtgcaagaggcattggacagggtcatgatggacagaactactatcattgttgcccatcgc
ttgagtacagtgaggaatgcagatatgattgcagtcattcatcaaggaaagattgttgaa
aaaggttcacacactgagctactcagggatcctcatggggcatatcaccagcttgtacag
ttgcaagaaattagcagtgagtcagaacaacatgatgaaagttgggaatcatttggcgct
agacaccataaccgtttcccattcccattttcatttggtgtatctcctggaatcaatatg
ctggaaacagcacctgcaaagcccaactcagaaccattaaaacatccaacagaaggtcta
gtttggcgcttggcctgtcttaacaagccagaaatcccagtcttactgctaggtattgta
gctgcaattgtcaacggcttaatattacccgcgtttgcagtactattttccactataatc
gacaatttctatgattcagccgataaactccggaaggagtctaagttttgggcgttaatg
tttttcattcttggtgtggcatccttgttgataaccccgacaaggacctacctctttgct
gttgctgggtgtaagttaattaaaaggatccgatccatgtgctttgagaaagttgttcac
atggaggtaggctggttcgacaaagccgagaactcgagcggtgccattggagggaggctg
tctgcagatgcagcttcagtacgaagtctggttggagatgcgcttgctttggtggttcag
aacattgcaacagtaattgctggcttggctgctgcttttgaagcaaactggcagttggct
ctcattatccttgttttcctacccctaataggaattaatggatttattcagctgcaattc
acaaagggtttcagcggagatgccaagaaaaggtatgaggaagcaagtcaagtagccaac
gaggcagttgggaatattagaacagtagcttctttctgtgctgaagagaaggtgatgcag
ctgtaccagaagaaatgtgaaggcccagcaaagacagggatgacacgaggcttgatcagt
gggttaggctttgggctatcattcttctttgtttattttatctatgcagtcactttttat
gctggagcccgtctttttcgagacgggaagacaacattctcaaagatcttaagagtgttc
tttgctctcagtatggtgggcctaggcgtctctcagtctggctcttatgcccctgatgcc
agtaaagctaaaagttgtgctgcttcaatatttgcaattcttgaccagatatcagaaata
gactctagtggcaggtctggaaagagactaaaaaatgtaaagggagacatcaagtttcgg
catgtcagtttcaggtatcccactaggcctgaaatccaaattttccgggatctttgcctg
actattcgctctggcaagacagttgccttggttggagaaagtgggtgtggaaaatccact
gtgatctcattactgcagagattttatgatcctgattcaggtcgtataacactggatggg
gccgacatccaaaagctgcagctgagatggctgaggcagcagatgggtttggtgagccag
gaaccaatgttattcaatgacaccatccgagccaatattggatatggaaaagaaggaaat
gcaacagaggcagaaatcatagctgcagcagaattagccaatgcccaccacttcattagt
agtttacaacaggggtatgatacagcagtaggtgaacgtggggtgcagttgtcaggagga
cagaagcaaagagtggccattgccagggctgtggtaaagggcccaaagatactgctacta
gatgaagccaccagtgcccttgacgctgaatctgaacgggtggttcaagatgccctggac
agaatcatggtggggaaaaccacattggtggtagcccaccggctgtccacgatcaaggga
gctgatttgattgcagtggtcaagaatgggttgattgcagaaaaaggaaatcatgaaagt
ttgatgaatattaagaatggtcgttatgcctccttggttgcactacatgccactgcttca
tctcagtga
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integrated database retrieval system
