Vitis riparia (riverbank grape): 117918571
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Entry
117918571 CDS
T07274
Name
(RefSeq) LOW QUALITY PROTEIN: ABC transporter B family member 11-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
117918571
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vri02000
]
117918571
04147 Exosome [BR:
vri04147
]
117918571
04090 CD molecules [BR:
vri04090
]
117918571
Enzymes [BR:
vri01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
117918571
Transporters [BR:
vri02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
117918571
Exosome [BR:
vri04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
117918571
CD molecules [BR:
vri04090
]
Proteins
117918571
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_29
AAA_22
AAA_16
RsgA_GTPase
AAA_21
Zeta_toxin
AAA_15
SbcC_Walker_B
DEAD
AAA_7
DLIC
AAA_30
AAA_23
nSTAND1
Motif
Other DBs
NCBI-GeneID:
117918571
NCBI-ProteinID:
XP_034691211
LinkDB
All DBs
Position
7:25464298..25471050
Genome browser
AA seq
1297 aa
AA seq
DB search
MAEENDLNGKNYMHEATTSSRGALETETVKSSGQNGKQQDSEKSKEEGKPSTVPFHKLFS
FADSTDMLLMITGTIGAAGNGICMPLMAILFGDLIDAFGQNQNNKDVVDIVSKVSLKFVY
LAVGAGIAAFFQVACWMVTGERQAARIRSLYLKTILRQDVAFFDKETNTGEVIGRMSGDT
VLIQDAMGEKVGKFIQLVSTFIGGFIIAFIKGWLLTLVMLSSIPLLVIAGGAMSLFLSKM
ATRGQNAYAKAATVVEQTIGSIRTVASFTGEKQAVTKYNQFLVNAYKSGVFEGLAAGLGL
GTVMFIIFASYALAVWFGAKMILEKGYTGGTVLNVIIAVLTGSMSLGQASPCMSAFAAGQ
AAAFKMFETIHRKPEIDVSDTKGKILEDIQGEIELRDVYFSYPARPDEQIFSGFSLSIPS
GTTAALVGQSGSGKSTVISLIERFYDPLAGEVLIDGINLKEFQLRWIRGKIGLVSQEPVL
FTSSIRDNIAYGKEGATIEEIRAAAELANASKFIDKLPQGLDTMVGEHGTQLSGGQKQRV
AIARAILKDPRILLLDEATSALDAESERVVQEALDRIMVNRTTIIVAHRLSTVRNADMIG
VIHRGKMVEKGSHTELLKDPEGAYSQLIRLQEVNKESENQATDSQDRPDGSIEFGRQSSQ
RMSFLRSVSRGSSGPGNSSRHSFSVSFGLPTGLGLPDNAIADAEAPRSSEQPPEVPIRRL
AYLNKPEIPVLLLGTVAAIVNGTILPIFGILISSVIKTFYEPPHELRKDSKFWALIFLVL
GVVSFLAFPARTYLFSVAGCKLIQRVRSMCFEKVVHMEVGWFDQPEHSSGAIGARLSADA
ATIRALVGDALAQVVQNAASAIAGLAIAFAASWQLAFIILALIPLIGLNGYVQIKFLKGF
SADAKMMYEEASQVANDAVGSIRTVASFCAEEKVMDLYKKKCEGPMRTGIRQGLVSGIGF
GVSFFLLFCVYALCFYAGARLVEAGKTTFGDVFRVFFALTMATVGISQSSSFSPDSSKAK
SAAASIFTIVDRKSTIDPSDESGTKLENVKGEIELRHISFKYPTRPDIQIFRDLSLTIRS
GKTVALVGESGSGKSTVIALLQRFYDPDSGRITLDGVDIQSLQLRWLRQQMGLVSQEPVL
FNDTIRANIAYGKEGHTTEAEVIAASELANAHKFISGLQQGYDTMVGERGIQLSGGQKQR
VAIARAMVKSPKILLLDEATSALDAESERVVQDALDRVMVNRTTVVVAHRLSTIKGADVI
AVVKNGVIVEKGKHETLINIKDGFYASLIALHMSASS
NT seq
3894 nt
NT seq
+upstream
nt +downstream
nt
atggctgaggagaatgacttgaatggaaaaaactatatgcatgaagccacaacatcaagc
aggggagcacttgaaacagagactgtgaaaagctctggccagaatgggaaacaacaagat
tcggagaagagcaaggaagaggggaagcccagcacagttccatttcacaagctgttctct
tttgcagattctactgatatgttgttgatgattaccggcacaatcggtgctgctgggaat
ggaatatgtatgcctcttatggcaatactttttggggacctgattgatgcttttggacaa
aaccagaacaacaaagatgtggttgatatagtatccaaggtttctctgaaatttgtctac
ttggctgtgggggctggtatagcagcattctttcaggtggcttgctggatggtcacaggg
gagaggcaggctgcaagaattaggagtctgtatttgaaaactatattgagacaagatgtt
gctttctttgataaggaaacaaacacaggagaggttatcggaaggatgtctggggacact
gttctaatacaagatgccatgggtgagaaggtagggaaatttatacagctggtatcgacg
ttcattggaggctttatcatagcattcattaaagggtggctgcttacccttgtcatgcta
tcatcaattcctcttcttgtgatagctggtggagctatgtctctcttcttatccaagatg
gcgacccgcggacaaaacgcttatgcaaaagcagcaactgtagtagaacagacaatcggc
tcaattagaacggttgcatcatttactggggaaaagcaagctgtaactaaatacaatcag
tttctggtaaatgcttacaaatcaggtgttttcgaaggtctggctgcaggattaggcctt
ggaacagttatgttcatcatctttgcaagttatgcattggcagtatggtttggtgcaaag
atgatactggaaaaaggatatactgggggtacagttctgaatgtcattattgccgtattg
actggttccatgtctctagggcaggcatctccttgcatgagtgcatttgctgctggtcag
gctgcagcattcaagatgtttgagacgatacacaggaagccagagatagatgtttctgac
accaaagggaagatattggaggacattcaaggagagatagagttaagggatgtatacttt
agctatccagccagaccagatgagcaaatcttcagtggattctctctttccatccctagt
ggcacaactgcagctttggttggacagagtggaagtgggaagtcaacagtaattagtctg
atagagaggttttatgatccccttgctggtgaagttcttatagatggtattaatctgaag
gagtttcagcttagatggattagggggaaaattggtcttgtcagccaggaaccggtcttg
ttcacatccagcattagggataatattgcatatggaaaagagggtgcaactattgaagag
ataagagctgcagctgagctagcaaatgcttctaaattcattgataaacttcctcagggg
ctagacacaatggttggtgagcatggaacacagctctctggaggacaaaagcagagagtt
gccatagcaagagcaattctgaaagacccgcgaattctacttttagatgaagctacaagt
gcacttgatgcagaatcagaaagagtagtacaagaagcattggacaggattatggtcaac
cgaacaaccattatagttgctcatcgtttgagtacagtgaggaatgccgatatgatcggt
gtcattcatcgtggaaagatggtagaaaaaggctcacacactgaactgctcaaggatcct
gaaggagcatactctcagcttatacgtttgcaagaagtgaataaagagtctgagaatcaa
gctacagattcccaagacagaccagatggcagcattgaattcggtagacagtcaagtcaa
cgaatgtcattcttgcgatccgtaagtcgtggatcatcaggaccaggaaatagcagtcgt
cactcattctccgtctcctttggcctacctacaggacttggcctccctgataatgctatt
gcagatgctgaagcccctcgctcatcagaacagcctccagaagttccaatccgccgcctt
gcctatctcaacaagccagagatccctgtgctgttactaggaaccgtagctgccatcgtc
aatggcaccattctcccaatatttggtatactcatttccagtgttatcaaaacattttat
gagcccccacacgaactcaggaaggattcaaaattttgggcattaatatttttagtcctg
ggtgtggtatcattcctagcattcccagcaaggacatacttattctctgtggctggctgt
aagttgatacagagggtcagatcaatgtgctttgagaaggtggttcacatggaggtgggt
tggttcgatcagcctgagcattcaagtggagcaattggtgcaaggctctctgcagatgct
gcaaccattcgagctctagttggagacgcgcttgctcaggttgttcagaatgctgcatca
gcaattgcaggtttggccattgcctttgcagcaagttggcagttagcatttatcatcctt
gctttgatacctttgataggacttaatggatatgtccagataaagttccttaagggattc
agtgctgatgcaaagatgatgtatgaggaagcaagccaagtggctaatgatgcagttggg
agtataagaacagttgcttctttctgtgctgaagagaaagtgatggatctgtacaaaaag
aaatgtgaaggccctatgagaacagggataaggcaagggctggtcagtgggataggattt
ggagtttctttcttcctgctgttctgtgtctatgcactctgtttctatgcaggagcccgg
cttgttgaagctggaaaaacaacatttggagatgtttttcgtgttttctttgctctgacc
atggctaccgttggaatttctcaatcaagttccttcagtcctgattccagcaaagccaag
tctgctgcagcttccatctttacaattgtagacaggaagtccacaatcgaccccagcgac
gagtctggtacaaaattagagaatgtgaagggcgagattgagcttcggcacataagcttt
aagtatccaactagaccagatattcagattttcagagacctcagcttgaccatccgtagt
ggcaagacagtggccttggtaggagaaagtgggagtggaaaatcaacagtcatcgccttg
ctgcaaagattttatgatccggattcaggtcgtatcacactggatggtgtggacattcaa
agcctccagttgaggtggttgaggcagcagatgggtctagtgagccaagaaccggtcttg
ttcaatgacaccatccgtgccaacattgcatatggaaaggaaggccataccactgaagca
gaagttatagctgcatcagagctggcaaatgcccacaagttcattagcggattacaacag
gggtatgacaccatggtgggagagagaggaatccaactatcaggtgggcaaaagcagaga
gtagccattgcaagagctatggtgaagagcccaaagatactgctactggatgaggcgacc
agtgcactagatgctgagtctgagcgggtggtacaagatgcattagaccgagtcatggtg
aacaggaccacagtggtggtagcccatcggttatccacaatcaagggtgctgatgttata
gccgtggtgaaaaatggagtcatagttgagaagggaaagcatgaaactctgataaacatc
aaagatgggttttatgcctccttaatagcacttcacatgagcgcttcctcttaa
DBGET
integrated database retrieval system
