Vitis riparia (riverbank grape): 117920866
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Entry
117920866 CDS
T07274
Name
(RefSeq) ABC transporter B family member 1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
117920866
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vri02000
]
117920866
04147 Exosome [BR:
vri04147
]
117920866
04090 CD molecules [BR:
vri04090
]
117920866
Enzymes [BR:
vri01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
117920866
Transporters [BR:
vri02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
117920866
Exosome [BR:
vri04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
117920866
CD molecules [BR:
vri04090
]
Proteins
117920866
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
ABC_ATPase
Zeta_toxin
AAA_22
AAA_29
RsgA_GTPase
AAA_30
nSTAND1
AAA_5
AAA_15
APS_kinase
SbcC_Walker_B
AAA_25
DUF815
DUF87
Rad17
DUF1360
Motif
Other DBs
NCBI-GeneID:
117920866
NCBI-ProteinID:
XP_034694422
LinkDB
All DBs
Position
8:19161085..19167953
Genome browser
AA seq
1354 aa
AA seq
DB search
MSQEAVEIKTTIEQWRWSEMQGLELVSPNTDDFKSHPTASRVSKSSAEGGEARDMDGTEP
KNQPQPQPQPQAQAQAHASGSGEKTELVPSSGFGELFRFADGLDYVLMTIGSIGAIVHGS
SLPIFLRFFADLVNSFGSNANNIDKMMQEVLKYAFYFLVVGAAIWASSWAEISCWMWTGE
RQSTKMRIKYLEAALNQDIQFFDTEVRTSDVVFAVNTDAVMVQDAISEKLGNFIHYMATF
VSGFVVGFTAVWQLALVTLAVVPLIAVIGGIHTATLAKLSAKSQEALSEAGNIAEQTIVQ
IRVVFAFVGESRALQAYSAALRISQRLGYKSGFSKGMGLGATYFTVFCCYALLLWYGGYL
VRHHYTNGGLAIATMFSVMLGGLALGQSAPSMSAFAKAKVAAAKIFRIIDHKPNIERNGE
TGLELESVTGQVELKNVDFSYPSRPEVQILSDFSLNVPAGKTIALVGSSGSGKSTVVSLI
ERFYDPTSGQVLLDGHDIKTFKLRWLRQQIGLVSQEPALFATTIKENMLLGRPDATLVEI
EEAARVANAHSFIVKLPEGFDTQVGERGFQLSGGQKQRIAIARAMLKNPAILLLDEATSA
LDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELIAKGE
NGVYAKLIRMQETAHETALSNARKSSARPSSARNSVSSPIIARNSSYGRSPYSRRLSDFS
TSDFSLSLDASHPNYRLEKLAFKEQASSFWRLAKMNSPEWVYALFGTIGSVVCGSISAFF
AYVLSAVLSVYYNQDHAYMTKQIGKYCYLLIGVSSAALLFNTLQHFFWDVVGENLTKRVR
EKMLAAVLKNEMAWFDQEENESARIAARLALDANNVRSAIGDRISVIMQNSALMLVACTA
GFVLQWRLALVLIAVFPVVVAATVLQKMFMQGFSGDLEGAHAKATQLAGEAIANVRTVAA
FNSEAKIVGLFSTNLQTPLRRCFWKGQIAGSGYGIAQFLLYASYALGLWYASWLVKHGIS
DFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFDLLDRKTEIEPDDPDAIPVT
DRLRGEVELKHVDFSYPSRPDVPVFRDLCLRARAGKTLALVGPSGCGKSSVIALVQRFYE
PTSGRVMIDGKDIRKYNLKSLRRHIAIVPQEPCLFATTIYENIAYGHESATEAEIIEAAT
LANAHKFVSALPDGYKTFVGERGVQLSGGQKQRIAIARAFLRKAELMLLDEATSALDAES
ERCIQEALERACSGKTTIVVAHRLSTIRNAHTIAVIDDGKVAEQGSHSHLLKNYPDGCYA
RMIQLQRFTHGQAVGMASGSSSSTRPRDEEEREG
NT seq
4065 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaagaagctgtagagataaagacgaccattgagcagtggagatggtcagaaatg
cagggtctggagttggtgtctcccaatactgacgactttaaaagccacccaacagcatct
agagtttcaaagtcgtctgcagaggggggagaggcaagagatatggatggcactgagccc
aagaatcaacctcaacctcaacctcaacctcaagcacaagctcaagctcatgctagtggc
agtggggagaagactgagcttgttccttcatctgggtttggcgagctttttcgattcgca
gatgggttggattatgttctgatgacaattgggtctattggagccatcgtacatggatct
tctctcccaattttccttcgttttttcgccgatctcgtcaattccttcgggtctaatgcc
aacaatattgataagatgatgcaagaagttctcaagtatgcattttacttccttgttgtg
ggtgctgcaatatgggcgtcttcatgggcagagatatcgtgttggatgtggaccggagag
aggcaatccaccaagatgaggatcaagtacctagaagcggctttgaaccaggacattcag
ttttttgacaccgaggttcggacctccgacgtcgtttttgccgttaacaccgatgcagtg
atggttcaagatgccattagcgagaagttgggtaatttcattcactacatggcaacattt
gtgtctggatttgtagtgggtttcactgctgtgtggcaattggcacttgtcactcttgct
gtggttcctctgattgctgtaattggcggcatccacaccgccacattggccaagctctct
gccaagagccaggaggctctttcagaggcggggaacattgcagaacagacgatagttcaa
attcgggttgttttcgcatttgttggagaatccagagcattacaagcctactccgcagcc
ttgaggatctctcagaggcttggttacaagagcggattttccaagggaatgggattgggt
gcaacatacttcactgttttctgttgttatgctcttctgctctggtatgggggttatctt
gttcggcaccattacaccaatggaggactagccatcgccaccatgttctctgtcatgctt
ggcggactcgctctggggcagtctgcaccgagcatgtcagcatttgccaaggcaaaagtt
gccgctgcaaaaattttccgtataattgaccacaagccaaatattgagagaaatggcgaa
acgggtctggaattggaatcagttacaggacaagtagagctgaaaaatgtagatttctcc
tacccatcaaggccagaggttcagatcctcagtgatttttccctaaacgtcccagccgga
aagaccatcgcccttgtaggaagcagtggctctggaaagagcactgtggtctctctcatt
gagagattctatgatcccacctcaggacaagttctgctagatgggcatgacataaagaca
tttaagctgaggtggctgaggcaacaaattgggctagtgagccaagagcctgctctgttt
gctaccaccattaaagaaaatatgctcttgggtaggcctgacgcaaccttagttgagatt
gaagaagctgccagagttgctaatgcccattcattcatagtgaagcttcccgaaggcttt
gacactcaggtaggggagagaggattccagctctcaggagggcagaagcaaagaatagct
atagcaagagcaatgcttaaaaatccagcaatcctcctcttagatgaggcgacaagcgca
ttggactctgagtcagaaaagctagtgcaagaggcccttgaccgtttcatgatcgggagg
acaactcttgtcattgcccaccgactctcaaccattcgcaaggctgaccttgtagctgta
ctccagcaggggagtgtctctgagattggaacccatgatgagctcatagccaaaggagaa
aatggtgtatatgcaaagctcatcagaatgcaggagacagcgcatgaaaccgctctcagt
aacgccagaaagagtagtgcaaggccttctagtgctagaaattcagtaagctcaccaata
attgccaggaactcctcctatggtcgatcaccttattcacgccggctatctgacttctct
acttctgattttagtctttcccttgatgcatcacatcccaattatcgcctggaaaagctt
gccttcaaggagcaagccagttccttctggcgccttgcaaaaatgaactctccagaatgg
gtttatgctttatttggtactataggctctgttgtttgtggctccattagcgccttcttt
gcctatgttctgagtgctgtccttagcgtgtattataatcaggaccatgcttacatgacc
aaacaaattggaaagtattgctatctgttaattggggtttcatcggctgcgcttctcttc
aacacactgcaacatttcttttgggatgtagtgggagaaaatcttacaaaacgggtgaga
gagaaaatgttggcagcagtgctgaagaatgaaatggcatggtttgatcaggaagagaat
gagagtgctaggattgctgctagactggctcttgatgccaataatgttaggtcagccatt
ggcgatcggatttcagtgatcatgcaaaactcagcactcatgctcgttgcctgcactgca
gggtttgttttacagtggcgccttgcccttgtcctcattgccgtcttccctgttgttgtt
gcagccactgttttgcagaaaatgttcatgcaaggtttctctggagatctagaaggtgcc
catgccaaggctacacaattagcaggagaagccatagccaatgtgagaacagttgctgca
ttcaattcagaagcaaaaattgtgggtcttttctccaccaacctccaaaccccactgcgg
cgctgtttttggaagggacagatagctggaagtggatatgggatagcccaattcttactt
tatgcttcctatgctctcggtctttggtatgcctcctggcttgtgaagcatgggatctct
gatttctcaaagacaatcagggttttcatggtcctcatggtctctgccaatggtgcggct
gaaacactgaccctggctcccgacttcatcaagggtggccgagccatgcgatcagtgttt
gaccttcttgaccgcaaaactgaaattgagcccgatgatccagatgccattccagttact
gatcgtcttcgtggtgaagtggaactcaagcacgtagacttctcttatccctcacgccct
gatgtgccagttttccgtgacctttgtcttcgtgcccgagcaggcaagactcttgcactt
gttggtccaagtgggtgtggcaagagttcagttattgctcttgtgcagagattctatgag
ccaacttctggacgcgtgatgattgatgggaaggacattagaaaatacaatctcaagtca
ttgcgaaggcacatagcaatagttccccaggagccatgcctctttgctacaaccatttat
gaaaacattgcttatggacacgagtcagcaactgaggctgagataattgaagccgccacc
ttggctaatgcccacaagttcgtatctgcattgcctgatggctacaaaacatttgtaggt
gaaaggggggttcaactgtctggaggacagaagcagcgaattgcaattgctagggctttt
ctaaggaaggcagaacttatgctgctagatgaggcaacgagtgctcttgatgctgagtca
gaaagatgcatccaggaggctctggagcgcgcttgctcggggaagaccaccattgtggtt
gctcaccggttatcaacaataagaaatgcccataccattgctgtgattgatgatgggaaa
gtggcggagcaaggatcccattcacatctattgaaaaattatcctgatgggtgttatgcc
cgaatgatacagttacagaggttcactcatgggcaggctgtgggaatggcttcaggttca
agttcttcgacaagacccagggacgaagaggagagagaaggctag
DBGET
integrated database retrieval system
