Vitis riparia (riverbank grape): 117921043
Help
Entry
117921043 CDS
T07274
Name
(RefSeq) syntaxin-121
KO
K08486
syntaxin 1B/2/3
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
117921043
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vri04131
]
117921043
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vri04147
]
117921043
Membrane trafficking [BR:
vri04131
]
SNARE
Syntaxin (Qa)
Stx-PM
117921043
Exosome [BR:
vri04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
117921043
Exosomal proteins of other body fluids (saliva and urine)
117921043
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
T2SSF
DUF5790
Synaptobrevin
DUF6097
Helo_like_N
ODV-E18
DUF2615
MCPsignal
DUF724
Motif
Other DBs
NCBI-GeneID:
117921043
NCBI-ProteinID:
XP_034694691
LinkDB
All DBs
Position
8:5810127..5811610
Genome browser
AA seq
323 aa
AA seq
DB search
MNDLFSGSFSRFRSEEPPPSVEMTSSATAGVNLDKFFEDVESIKEELREMESLQQKLHDA
HEQSKTLHNANSVKELRSRMDSHVSLALKKAKLIKLRLEALDRSNAANRSLPGCGPGSSS
DRTRTSVVNGLRKKLRDSMDAFNSIRNQITSEYRETVQRRYFTVTGENPDEKTVDLLIST
GESETFLQKAIQEQGRGRVLDTISEIRERHESVKELERNLKELHQVFLDMAVLVQAQGEQ
IDDIESQVARANSFVRGGTQQLQTARKHQISSRKWTCYGIIILIVIILLIVLFTVRPWEN
NGSSSSGNTSSTSPPPPPPPTQA
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatctcttctccggttccttctcccgcttccgcagcgaagagccgcctccgtct
gtcgagatgacctcctctgccaccgccggtgtcaatctcgacaagttcttcgaagatgtc
gaatccatcaaggaggaactccgagagatggagtccctgcagcagaagctccacgacgct
cacgagcagagcaagactctccacaacgccaactccgtcaaggagctccgatcgcggatg
gactctcacgtctccctcgctctcaagaaggccaagctcatcaagctccgcctcgaagcc
ctcgatcgctccaacgccgccaaccgcagtctccccggatgcggccccggttcttcctcc
gaccgcacccgcacatccgtcgtcaacggccttcgcaagaagctcagggactccatggac
gccttcaactccatccgcaaccaaatcacctccgagtatcgcgaaaccgtccagcgccgc
tacttcaccgtcaccggcgaaaatcccgacgaaaaaaccgtagatctgctcatctccacc
ggcgagagcgaaaccttccttcagaaggcgatccaagagcaaggcagaggtagagttctg
gacaccatctccgagattcgcgagcgccacgagtccgtcaaagaactggagaggaacctc
aaggaactccaccaggtgttcctcgacatggctgtcctggtccaagctcagggagagcaa
atcgacgacatcgagagccaggtggcaagagccaattcgttcgttagaggcggaacacag
caactccaaacggcgcgtaagcaccagatcagcagccgcaagtggacctgttacggtatt
atcatcttgattgtgattatcttgttgattgtgctcttcaccgtgcggccttgggagaac
aacggcagcagcagtagcgggaacaccagtagcacatctccacctccaccacctccacct
actcaggcgtag
DBGET
integrated database retrieval system
