Vitis riparia (riverbank grape): 117921975
Help
Entry
117921975 CDS
T07274
Name
(RefSeq) coatomer subunit beta-1-like
KO
K17301
coatomer subunit beta
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vri04131
]
117921975
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vri04147
]
117921975
Membrane trafficking [BR:
vri04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
117921975
Exosome [BR:
vri04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
117921975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Coatomer_b_Cpla
Coatamer_beta_C
Cnd1
HEAT_2
Coatomer_g_Cpla
HEAT
Alpha_adaptinC2
RAG2
Motif
Other DBs
NCBI-GeneID:
117921975
NCBI-ProteinID:
XP_034695814
LinkDB
All DBs
Position
9:complement(20415164..20425086)
Genome browser
AA seq
949 aa
AA seq
DB search
MERSCSLLIHFDKATPAMANEIKQALESNDFDAKIDAMKKAILMILNGESIPQLFITIIR
YVLPSEDHIIQRLLLLYLETLKKTDSTGRMLPEMILVIQNLRNNLQHPNEYSRGVCLRFL
CRVAEPELIEPLVPSIIGNLEHRHPFVRRNAVLAVMSIYGLPHGEQLLDHAPELIQQLLV
SELDASVKRNAFLMLFNCAQFKAVDYVFSNIDRVPDWDEQMQMVVLELIKKVCRTNKDEK
GKYIKIIISLLNSPLTAVIYECANTLMSLSSAPTAIRAAANTYCQLLLSQSDNNVKLIVL
DRLNELKSLHRGVMVEMIMDVLRALSSPSLDIRRKTNDIALDLITPKNVDEVVLVLKKEV
VKTQSVELEKNGEYRQMLIQGIHSCAIKFPEVASTVVLLLMDFLGDNNVASAIDVIVFVR
EIIETNPKLRVSIITRLLDTFYQIRAARVCSCALWILGEYCLSIPEVESGIETIKQCLGE
LPFFTASEEGDAPNALKSSQQVNSITVSSRRPAILADGTYATQSAAIETTLSPQTLVQGS
LALVGNLRSLILSGDFFLGAVVACTLTKLVLRLEDVQELKTEVNKLSTEVLLIMVSMLQL
GQSSYFPHPIDNDSYDRIVLCIRLLCNTGDEIRKIWLQSCRQSFVKMLADKQFRETEEIK
AKAQISHAQPDDLIDFYHLKSRKGMSQLELEDEVQDDLKRATGGFTKDGDDVNKLNRILQ
LTGFSDPVYAEAYVTVHHYDIVLDVTIINRTKLTLQNLCLELATMGDLKLVEHPQNYSLA
PRSSKQIKANIKVSSTETGVIFGNIVYETSNVLERNVIVLNDIHIDIMDYISPASCADVA
FRTMWAEFEWENKVAVNTIIEEEKEFLDHIIKSTNMKCLTPLSALDGECGFLAANLYAKS
VFGEDALVNVSIEKQANSKITGFIRIRSKTQGIALSLGDKITLKQKGSS
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atggagagatcgtgcagtctcctcatccacttcgacaaggccacgcccgccatggccaac
gagatcaaacaggccttggaatccaacgacttcgacgccaaaatcgacgctatgaagaaa
gccattttgatgatcctcaacggagaatctattccccaactcttcatcaccatcatccgc
tacgtcctcccatcggaggaccacatcatccaaaggctcctcttgctctatctcgaaacc
ctaaaaaagacagactccaccggccggatgcttccggagatgatcctcgtgattcagaac
ctccgcaacaacctccagcaccctaacgagtacagccgcggcgtctgcctccgcttcctg
tgccgcgtcgccgagcccgagctcatcgagcctctggtaccctcaatcatcggaaacctt
gagcaccgccacccctttgttcggcggaacgcggtgctcgcggttatgtcgatctatggc
ctccctcatggcgagcagttgctggatcacgctcccgagctgatccagcagctgctggtg
tcggagctggacgcttccgttaagcggaatgcgttcttgatgttgtttaattgtgcacaa
tttaaggctgttgattatgttttcagtaatattgatagggttccggattgggatgagcag
atgcagatggtggtgttggaattgattaagaaggtttgtaggacaaataaggatgaaaag
gggaagtacattaagataattatatctttgttgaactcgcccttgactgcggttatatac
gagtgtgcaaatactctaatgtccttgtcatctgccccgactgccattagggctgcggca
aacacatactgtcagctgttgctgtcacagagtgataacaatgttaagcttattgtgtta
gataggctcaatgagcttaagtctttgcataggggggtcatggttgagatgattatggat
gtgcttagggccttatcgagtccaagtcttgatattaggaggaaaacaaatgatattgcg
cttgatttgataaccccgaagaatgttgatgaggttgtgcttgtgctgaagaaggaggtg
gtgaagacacagagtgttgagcttgagaagaatggggagtataggcaaatgcttatacaa
gggatacattcttgtgcgattaagttcccagaggtggcgagcacggttgttcttcttttg
atggatttcttgggggacaacaatgttgcttctgccatagatgtgattgtttttgtgcgt
gagattattgaaacaaatccaaagttacgggtatcgataataacgaggcttttggacact
ttttaccagatccgtgctgctagggtgtgttcttgtgctctttggatccttggagagtac
tgcctctctattccggaagttgagagtggaattgagacaattaagcagtgtcttggggag
ctcccattcttcacggctagtgaggaaggagatgcacccaatgctctgaagagttctcaa
caggtgaactctattactgtatcttctagacgtcctgccattcttgcagatgggacctat
gccacacagagtgcagccatagaaactaccttgtcaccacaaacccttgttcaaggatca
ttggctttggttggaaacttgagatcattgattctttcaggcgactttttcctcggggca
gttgttgcttgcacactgacaaagcttgttttgcgattggaagatgttcaggaattgaaa
actgaagtgaacaaattatctacagaagtcttattgatcatggtttctatgctgcaactg
ggtcagtcctcgtatttcccacacccaatcgacaatgattcttatgataggattgtcctt
tgtatcagattgttatgtaacactggtgatgagattaggaagatatggctgcagtcttgc
cgacagagttttgttaaaatgctggctgataagcagtttcgtgaaacagaggaaattaaa
gcaaaggctcaaatttcccatgcacagccagatgatcttattgacttctatcatctgaaa
agcaggaagggtatgagccagcttgaattggaagatgaggtgcaagatgatctcaaacgt
gctactggagggttcacaaaggatggagatgatgtaaataaacttaatcgcattcttcag
ctcacaggattcagtgaccctgtctatgctgaagcgtatgtaacagttcatcattatgac
attgtccttgatgttaccatcatcaatcgaaccaagctgaccctccagaatttgtgcttg
gagttggcaaccatgggtgatctcaaacttgtggagcacccacaaaactattcattagct
ccccgatcaagcaagcagattaaggcaaatattaaggtttcttcaactgaaacaggagtc
atatttggtaacattgtttacgagacttcaaatgtgcttgaacgaaatgttattgtcctc
aatgacatccatattgatataatggattacatttctccggcatcctgtgctgatgtggca
tttagaaccatgtgggctgagtttgagtgggaaaacaaggttgctgtaaacactattatt
gaagaagagaaagaatttttggaccatataatcaagtcaactaacatgaagtgccttact
ccactctcggcattagatggggagtgtgggttccttgcggcaaacctatatgcaaagagc
gtatttggagaggatgctttagtaaatgtgagcattgagaaacaagccaatagcaaaata
actggattcatcagaatacgaagtaaaactcaaggaattgctctcagtctcggggataaa
atcactctcaaacagaagggaagcagttga
DBGET
integrated database retrieval system
