KEGG   Vitis riparia (riverbank grape): 117922175
Entry
117922175         CDS       T07274                                 
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1 homolog isoform X1
  KO
K22544  deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
vri  Vitis riparia (riverbank grape)
Pathway
vri03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:vri00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    117922175
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vri03400]
    117922175
DNA repair and recombination proteins [BR:vri03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     117922175
SSDB
Motif
Pfam: HD HD_assoc_2 GyrB_insert
Other DBs
NCBI-GeneID: 117922175
NCBI-ProteinID: XP_034696109
LinkDB
Position
1:9750341..9757178
AA seq 552 aa
MGALCNHDKLSSFTSAHDRRFSKHVHDNVHGNIYLDPLFMKFIDTEEFQRLRDLKQLGVA
HMVYPGAVHSRFEHSLGVYWLAGEAVHKLQAYQGLELGIDPFDIQTVKLAGLLHDVGHGP
FSHTFEQAFLPRVLNGSKWSHEEMSLKMIDHIVDEHNIEIDSESLKKTKEMVVAGSEYAS
SESMKEKRFLYDIVANGRNGIDVDKFDYIVRDSRACGLGCNFEFRSLLSVSLTKKKKPVR
LLETMRVIDDEICYRAKEYLTIHKLFATRADLHRTVYMHAKVKAIELMVIDALLKANDHL
KISSFIDQPAEYWKLDDSILKTIETAPDQELKESRDLILRIRRRDLYQFCNEFSVPKDRL
EHFKDITPQDIICSQKNSSITLKEEDVSVSNVRINLTRGRNNPLESIKFFKDFESDEKFP
IQDDRISHLLPAGYEDRIVRVYSKKPELVEAVSEAFENFQLKTYRMKAQVHDTPEKKKRR
RSINLPQQCECTNFASPLSCSDTVTVNSGSNDLIDEICLFPTCINDTVTTLFSSIHEPEG
SSKLASGYLLHP
NT seq 1659 nt   +upstreamnt  +downstreamnt
atgggagccttgtgtaaccatgataagctctcaagcttcacgtccgcccacgaccgcaga
ttctccaagcacgttcacgacaacgttcacggcaacatctatctcgatccgctctttatg
aagtttattgacactgaagagttccagagacttcgagatctgaagcaactaggtgtagca
cacatggtctacccaggggctgtacattctcggtttgagcattcactaggtgtttattgg
ctggctggggaagctgttcataaacttcaagcttaccaaggattggagcttggaattgac
ccatttgatatacagacagtaaaacttgctgggctactgcatgatgtgggccatggacca
ttcagccacacgtttgagcaggcatttcttccccgggttcttaatggctccaaatggtct
catgaggaaatgtctctgaagatgatagaccacatcgttgatgaacacaatattgaaatt
gattctgaaagccttaagaaaacaaaggaaatggtagttgctggctctgaatatgcttca
tcagaaagcatgaaagagaagcgtttcttatatgatattgttgcaaatggtcgaaatgga
atagatgttgacaagtttgattacattgttcgtgattccagggcttgtggtttaggttgc
aattttgagtttcgtagccttctctctgtctctctcaccaaaaaaaaaaaacctgtcagg
ttattggagacgatgcgagtaatagatgatgagatatgctatcgtgctaaggaatatctt
acaatccacaagttatttgccactcgtgctgatctgcatcgaacagtctatatgcatgca
aaagtaaaggcaatagagctcatggtgatagatgcactgttaaaagcaaatgatcatctt
aagatttcatccttcatcgatcaaccagcagaatattggaagttagatgactcaatatta
aaaaccattgaaactgctcctgaccaagagctgaaggaatctagagatttgatcctacgg
attcggagaagggatctgtatcagttctgcaatgaattctctgttccaaaggataggctg
gagcacttcaaagacatcactccccaagatattatttgttctcagaaaaatagcagcatt
actctaaaagaagaagatgtttctgtgagcaatgtcaggattaacttgacacgtgggagg
aacaaccctctggaaagcatcaaatttttcaaggattttgagagtgatgagaagttcccc
atacaagatgatcgcatcagtcacttgctgcctgcaggttacgaagatagaattgtgagg
gtgtactctaaaaagcctgaactggtggaagcagtttctgaggcctttgaaaattttcag
ctaaagacatacagaatgaaagcccaagtacatgacacacctgagaagaagaaacgcaga
aggagtataaatcttccccaacaatgtgagtgcactaattttgcttcacctctctcatgt
agtgacactgtgacagttaatagtggctccaatgatttgattgatgaaatttgtttgttc
cccacatgtattaatgacactgtcacaaccttattttcaagcattcatgagccagaggga
agttccaaattggcttctggttaccttctccatccttga

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