Vitis riparia (riverbank grape): 117928031
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Entry
117928031 CDS
T07274
Name
(RefSeq) nuclear pore complex protein NUP98A
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117928031
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vri03019
]
117928031
03036 Chromosome and associated proteins [BR:
vri03036
]
117928031
Messenger RNA biogenesis [BR:
vri03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117928031
Chromosome and associated proteins [BR:
vri03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
117928031
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
117928031
NCBI-ProteinID:
XP_034703677
LinkDB
All DBs
Position
2:17153525..17166633
Genome browser
AA seq
1047 aa
AA seq
DB search
MFGSSNPFGQSSSSPFGSQSVFGQTNNATTNPFAPKPFGSTTPFGAQTGGSIFGGTSTGV
FGATQSSSPLPSTATFGASSSPAFGSSVPAFGASSTPAFGSSSSSFGGSSVFGQKPGFGG
FGSTPTQTSPFGSAFQQSQPAFGSSLFGSSTPFGASQAAFGASSTPAFAATSTPAFGATS
TPAFGATSTTPAFGATSTPAFGATGTSAFGSTPSPTFGSTGSAFGASGAPVFASSGAFGA
SSTPVFGSSTTSAFGTSSTPAFGASSTPAFGASSTPSFSFGSTPAFGQSTAAFGSSPFGT
ATSPFGAQSSPFGAQATTPTFGSTGFGQSAFGGQRGGSRVAAYTPTTEVDSGSGTQPVGK
LESISAMPVYKDKSHEELRWEDYQLGDKGGPAPASQSTGGVGFGASNTQSNPFAASPAYG
QSSANPFSSSTSSNPFAPRTPAFGSSGFGGSSTPAFSSSPFGASSTSNPFGSTSSATPSI
FGASSTPPFGASSSPSLFGASSSSGFGSSPSIFGSTSAQGTAPAFGSGLNFGNTQSSPLF
QSSTPSLGQTASAFGQSTSAFGQSTTPSFGQSSIFNTPSTGFGGNLFSSTPPLLSTSNPV
GFGQTTPSLSTPFQPAQPAQTIGAFGFSNFGQTQAAGASGFGGGSNIFGSNAFGQSSAAQ
NSVVVQPAAPAANPFGTLPAMPQMSIGRTGTAPSIQYGISSMPVVDKPAPVRISSLLTSR
HLSQRRIRLPARKYHPKNDAPKVPFFSDDEETPSTPKADALFVPRENPRSLVIRPMEQWS
LRSNAEKTSPLKEASKPVHENGKVSEGLNGSNAGDKDANLVENGLAKERIHTMKPNQKPN
GVHDDHSIQKGDSYITLTGHRAGEAAIVYEHGADIEALMPKLRRSDYYTEPRIQELAAKE
RAEPGFCRRVKDFVVGRHGYGSIKFMGETDVRRLDLESLVQFNNREVIVYMDDSKKPPVG
QGLNKPAEVTLLNIKCFDKKTGVQYTEGPKIGKYKEMLKRKAEDQGAEFVSYDPMKGEWK
FRVNHFSKYELGDEEIDDWDMHAVLDC
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atgtttggttctagtaacccatttgggcagtcatccagtagcccatttgggtctcaatca
gtttttgggcagaccaataatgctactaccaatccttttgcccctaaaccctttggtagt
acaaccccttttggcgcacagactgggggttccatatttggtggcacttcaactggtgtg
tttggtgcaacccaatcttcttccccattgccttccacagcaacatttggcgcttcttca
tcaccggcttttggaagttcagtgcctgcttttggagcttcttcaactcctgcttttggt
agttcatcatcatcatttggcggatcttctgtatttgggcagaagcctggttttggaggt
tttgggtccactcctactcaaacaagtccttttggaagtgcttttcaacagtcgcaacca
gcattcggaagcagtctatttggttcctctacaccttttggtgcaagtcaagctgcattc
ggtgctagtagcaccccagcctttgctgccacaagcacaccagcatttggtgctaccagc
acaccagcgtttggtgctactagtactacgcccgcatttggtgctacaagcacccctgcc
tttggtgctacaggcacttctgcctttggttcaacaccaagtccaacatttggtagcaca
ggcagtgcatttggtgcttcaggcgccccagtctttgcatctagtggagcatttggcgct
tcaagcacccctgtttttggatcatcaactacatctgcatttggtacttcaagcactcca
gcatttggtgcttcaagcacccctgcctttggtgcttctagtaccccatctttcagtttt
gggtcaactccagcatttggccaatcaactgctgcatttggtagcagcccctttggaaca
gctacttctccttttggagctcaaagctctccattcggagcccaggccacaacgccaaca
tttgggagcactggttttgggcagtcagcttttgggggtcaacgtggcggaagtagagta
gctgcttacacaccaactactgaagtagatagtggcagtggtacacaacctgtgggaaag
ctggagtcaatatctgccatgcctgtctacaaagataaaagccatgaagagctgaggtgg
gaagactaccagttgggggacaaaggtggaccagctcctgctagtcagtctacaggtggg
gttggctttggtgcatccaacacacagtcaaatccttttgctgcttcaccagcatatggt
cagtcatctgctaatcctttttcctcctcaacatcttcaaatccatttgctccaaggact
ccagcctttggcagttctggctttggaggctcatccactcctgcattcagttcatccccc
tttggtgcttcatccacatccaacccttttggatcaacttcatctgcaacaccttctata
tttggagcatcatcaacccctccatttggagccagttcttctccgtctctttttggagca
tcaagctcgtcaggctttgggtcatcaccttcaatttttggttccacttcagctcaggga
acggctccagcatttggttctggcttaaattttggtaacactcaatcatcaccattgttc
cagtcttcaacaccttctcttgggcagacggcttctgcttttggacagtctacctcggca
tttggacagagcactaccccttcctttggtcaatcaagcatattcaacacaccttcaact
gggtttggaggaaacttgttttcaagcactccaccactactctctacaagcaaccctgtg
ggtttcggtcaaacaactccctctctttcaacaccatttcaacctgctcaacctgctcag
acaattggtgcttttggatttagcaacttcggtcagacacaagcagctggtgcaagtggc
tttggtggggggtcaaacatttttggttcaaatgcctttggacaatcatctgctgctcaa
aactctgtagttgtgcaacctgctgctcctgcagcaaatccttttggaactctacctgca
atgcctcaaatgtcgattggtcgcactggaactgcaccttctattcaatatgggatttct
agcatgcctgttgttgacaagcctgctcctgttagaatatcatccttattgacttctcga
cacctctctcaaaggcggattaggttgcctgcaaggaaatatcatcctaaaaatgatgct
ccaaaggtgccatttttcagtgatgatgaagaaacacctagtacaccaaaggcagatgct
ctctttgtacccagggagaatccaagatctcttgtcattcgcccaatggaacagtggtct
ttgagatctaatgcagaaaaaacatctccattgaaggaggcatctaaaccagtacatgag
aatggtaaagtgtctgaaggattaaatggctccaatgctggtgataaggatgcaaatctt
gttgaaaatggccttgccaaggagcgaattcataccatgaagcccaaccagaaacctaat
ggagtacatgatgatcattccatacaaaaaggtgactcgtatatcactcttactgggcac
agagctggtgaggcagccattgtgtatgaacatggggctgacattgaagcactaatgcca
aagcttcgacgctctgattactacacggagcctcggatccaagaattggcagccaaggaa
agggctgaacctgggttctgccgccgtgttaaggactttgtggttggaaggcatggctat
ggcagcataaaattcatgggggagacagatgtgcggcggcttgatcttgagtcccttgtc
cagttcaacaatcgagaagtgattgtttatatggatgacagcaagaaacctcctgttgga
caaggcctcaacaagcctgctgaggtgacccttctaaacataaaatgctttgacaaaaag
accggagttcagtatacagaagggccaaaaattggtaaatacaaggagatgctgaagagg
aaggctgaggaccaaggtgctgagtttgtgtcctatgatcccatgaaaggagaatggaag
ttcagggtcaaccatttcagtaaatacgagcttggagatgaagagatagatgactgggat
atgcatgctgtcctggattgctga
DBGET
integrated database retrieval system
