Vitis riparia (riverbank grape): 117931233
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Entry
117931233 CDS
T07274
Name
(RefSeq) ATP-dependent DNA helicase At3g02060, chloroplastic
Organism
vri
Vitis riparia (riverbank grape)
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CarD_TRCF_RID
TRCF
RecG_dom3_C
Motif
Other DBs
NCBI-GeneID:
117931233
NCBI-ProteinID:
XP_034708047
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Position
14:5725376..5738509
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AA seq
823 aa
AA seq
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MAVARAHLFPISVSEHDVSSSFLGSSTRVWRFFFACPCHARIKRTHLLTTAVYTEGVSIT
RSVQRRERMEPESDDITILNERIRREQSKRDVSRAPVVDSEEADKYIQLVKEQQRRGLQK
LKGERVGKENGQFSYKVDPYTLRSGDYVVHKKVGIGRFVGIKLDVPKDSSNPIEYVFIEY
ADGMAKLPVKQASRMLYRYNLPSESKRPRTLSKLSDTSIWERRRIKGRVAIQKMVVDLME
LYLHRLKQKRPPYPKSPGMAEFEAQFSYEPTPDQKQAFIDVEKDLTERETPMDRLICGDV
GFGKTEVAIRAIFRVVSAGKQAMVLAPTIVLAKQHFDVITERFSKYPNIKVGLLSRFQTT
AEKEKHLRMIKHGDLDIIVGTHSLLGNRVVYSNLGLLVVDEEQRFGVKQKEKIASFKTSV
DVLTLSATPIPRTLYLALTGFRDASLISTPPPERVPIITHLSAYNKEKIISAIKFELGRG
GQVFYVLPRIKGLEEVMEFLECSFPDVEIAIAHGKQYSKQLEETMDRFAQGEIKILICTN
IVESGLDIQNANTIIIQEVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSDQALER
LSALEECRDLGQGFQLAERDMGIRGFGNIFGEQQTGDVGNVGIDLFFEMLFESLSKVEEH
RLISVPYQSVQFDININPHLPSEYINYLENPMEIISEAEKSAEEDIWSLMQFTENLRRQY
GKEPYSMEVLLKKLYVKRMAADLGITRIYASGKTVIMRTKMNKKVFKLITDSMASDIIRN
SLVFEENQIKAELLLELPREQFLNWVFQCLAELHASLPALIKY
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atggccgtcgctagagctcatctcttccccatttccgtctctgaacacgatgtctcctcc
tcatttctggggtcgtctactagggtttggagattcttcttcgcgtgtccttgccatgcc
agaatcaaacgcacccatttactcacaaccgctgtttataccgaaggcgtttcaatcacc
cggtcggtgcaacgacgggagaggatggagccggaaagcgacgacataacgattctgaac
gagaggattcgtcgcgagcagagtaagagggatgtttcgagggctccggtggtggattcg
gaggaggcggataagtatattcagctggtgaaggagcagcagcggaggggtttgcagaag
ctgaagggtgagagggtggggaaggagaatgggcaattcagttataaggttgatccttat
acgcttcgttctggagattatgttgtgcataagaaggtgggtatcgggcgatttgtcggg
attaagttggacgttcccaaggattcttccaacccaattgagtatgtgtttatagagtat
gcagatggaatggcaaagcttccggtgaagcaagcttctcgtatgctttatcgatataat
ctccccagtgaatcaaaaaggccccgcacattgagcaagttaagtgatactagtatatgg
gaaaggagaaggataaaaggtcgggttgccattcagaaaatggttgttgatttgatggag
ctgtatttacatcggctgaaacaaaaaaggcctccctatccaaagagtcctggcatggct
gagtttgaagctcagttttcttatgagccgacaccggatcaaaaacaggctttcattgat
gttgagaaggacttgacagagagagaaactccaatggacagattaatttgtggagatgtt
gggtttggcaaaactgaagttgcaatacgggcaatatttcgtgttgtctcagcagggaag
caagctatggttctggcacctacaattgttttagccaaacaacattttgatgttattaca
gagcggttctctaagtatcctaacatcaaggttgggcttctgagcagatttcagaccaca
gcagagaaagagaagcatctgcgcatgattaaacatggtgatctagacattattgtggga
actcactcgcttcttggaaatcgtgttgtttatagtaatctaggccttcttgtggtcgat
gaggaacagaggtttggtgtcaaacagaaggagaagattgcttcatttaaaacttcagtt
gatgttctcactctttctgcaacacccatcccacgaaccctttatttagcattgactggg
tttcgtgatgctagtttgatttcaacaccacctccagaaagagttcccatcataactcat
ctttcagcatacaataaagagaagataatatcggcaatcaagtttgagctgggccgaggt
ggccaagttttctatgttttgcctcgtataaaaggacttgaagaagtgatggaatttctt
gaatgctcatttccagatgttgaaatagctattgcacatggcaagcaatactcaaagcag
cttgaggaaaccatggatagatttgcacaaggagaaattaagattcttatatgcacaaat
atagtagaaagtggacttgacattcagaatgcaaacaccatcataattcaggaagttcaa
caatttggcctggcacaattataccagttgcgtggaagagtggggcgtgcagataaggaa
gctcatgcatacttgttttaccctgataagtcactgctgtctgatcaagcactggagaga
ctgtcagctcttgaagaatgtcgtgaccttggtcaaggttttcaacttgcagagagagac
atgggtataagaggctttggtaacatctttggtgagcagcagacaggggatgttggaaat
gtaggcattgatctcttctttgaaatgctttttgagagcttgtcaaaggttgaagagcac
cgtcttatttcagttccttaccaatcagtgcagtttgacataaatataaaccctcatctc
ccttctgagtacataaattatctagagaaccccatggaaataattagtgaagctgagaaa
tctgctgaagaggacatttggagtttgatgcaattcacagagaatctgcgccgtcaatat
gggaaagagccttactcaatggaggttctattgaaaaagctttatgtgaagagaatggca
gcagatcttgggattaccaggatatatgcttcaggaaagacggttatcatgagaacaaaa
atgaataaaaaggttttcaagctgataacagattcaatggcttctgacatcatcagaaat
tctcttgtttttgaggagaatcagattaaggcggaactgcttctggagctaccgagagag
cagttcctcaattgggttttccaatgcttagctgaactgcatgcttccctgccagccctt
attaagtactag
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