Veillonella rodentium: 44547418_01289
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Entry
44547418_01289 CDS
T05216
Symbol
aspS
Name
(GenBank) Aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
vrm
Veillonella rodentium
Pathway
vrm00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
vrm00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
44547418_01289 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
vrm01007
]
44547418_01289 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vrm03016
]
44547418_01289 (aspS)
03029 Mitochondrial biogenesis [BR:
vrm03029
]
44547418_01289 (aspS)
Enzymes [BR:
vrm01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
44547418_01289 (aspS)
Amino acid related enzymes [BR:
vrm01007
]
Aminoacyl-tRNA synthetase
Class II (A)
44547418_01289 (aspS)
Transfer RNA biogenesis [BR:
vrm03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
44547418_01289 (aspS)
Prokaryotic type
Other AARSs
44547418_01289 (aspS)
Mitochondrial biogenesis [BR:
vrm03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
44547418_01289 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2d
tRNA-synt_2b
Motif
Other DBs
NCBI-ProteinID:
SNV69365
UniProt:
A0A239ZE16
LinkDB
All DBs
Position
1:complement(1378427..1380223)
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AA seq
598 aa
AA seq
DB search
METMQGLHRTHGCGTISEAEVDKEVVLCGWVERRRDHGGLIFLDLRDRSGVVQVVASPDH
NVESFHKAEDVRNEYVLCVRGKITKRDADAVNPNLPTGAYEMFCEELRVLNSSKTPPFYI
QDDIDVDENIRLKYRYLDLRRPEMQRNLILRHKVTKAMRDFFDSRDFLEIETPMLTKSTP
EGARDYLVPSRVNAGTFYALPQSPQIFKQILMVAGYEKYFQIVRCFRDEDLRADRQPEFT
QLDLEMSFVDEEDIYALLEEMIAHVFKTALGKEISLPMPRITWDEAMDKYGSDKPDLRFD
MAFTDVTELVKDTEFKVFRSVIDNGGIVKGIVVPGDAGIPRRELDDLVEYVNRYGAKGLA
WACFNEDGSIKSQIMKFLGEDTIRSIGEKMGAKGGDLVLMIADKPATVARALGELRLEMA
RRMNMIDEDKLAFTWVTDFPMFEYNEDEKRYVAMHHPFTMPRHEDLDKLQSDPGSVKAIA
YDMVLNGVEIGGGSLRIYQSDVQEKVFAAIGLSSEEAKSKFGFMLDAFQYGAPPHAGCAF
GLDRLVMLMAKRQSIRDVIAFPKTQSASDIMSQAPSEVEMKQLKELHIKTDLGEEKLV
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atggaaacaatgcaaggcttacaccgtacacacggttgtggcactatttccgaagcggag
gtagataaagaggtcgtattatgtggttgggtggaacgtcgtcgtgaccacggcggattg
attttcttggatctacgcgatcgttccggtgtagtacaagtagtggcatctcctgatcat
aatgtggaatcgttccacaaagcggaggatgtgcgtaatgaatatgtgctatgtgtgcgc
ggtaaaatcacaaaacgcgatgcggatgcagtaaatccgaaccttccgacgggggcatat
gaaatgttctgcgaggagttgcgcgtgttgaattcctctaaaacgcctcctttctatatt
caagatgatatcgacgtggacgaaaatatccgtttgaaatatcgttatctcgacttacgt
cgtcctgaaatgcaacgcaacttgattttgcgtcataaggtgacaaaggcgatgcgcgat
ttcttcgacagtcgtgatttcttggaaattgaaacaccgatgcttaccaagtccacaccg
gaaggggctcgtgattatctcgtgccgtcccgtgtgaatgcaggtacattttatgcattg
cctcagtctccacagatttttaaacaaatcctgatggtggcggggtatgaaaaatatttc
caaatcgttcgctgtttccgcgatgaagatttacgtgcggaccgtcaacctgagtttact
cagctggacttggaaatgtcctttgttgatgaggaagatatttatgcattgctcgaagag
atgatcgctcatgtatttaaaacggcgttaggtaaagaaatttctttgcctatgcctcgc
attacatgggatgaagcgatggataaatacggttccgataagccggatcttcgctttgat
atggcatttacggatgttaccgaattggtaaaagataccgagtttaaagtattccgctcc
gtaatcgataacggtggtatcgtaaaaggtatcgtcgtacccggcgatgcggggattcct
cgccgcgagcttgacgatcttgttgaatatgtaaaccggtatggtgcgaaaggccttgca
tgggcatgctttaacgaagatggctccatcaaatctcagatcatgaaattcctaggtgaa
gatacgattcgaagcatcggtgagaaaatgggcgctaagggtggcgacctcgtattgatg
atcgccgataaacctgctacggtagctcgtgcattgggtgaattacgccttgaaatggct
cgtcgcatgaacatgattgacgaagataaactggctttcacatgggtgacggatttccct
atgtttgaatacaatgaagatgaaaaacgctatgttgcgatgcatcatccgttcacgatg
cctcgccatgaggatcttgataaattgcagtccgatccgggcagcgtgaaagctatcgca
tatgatatggtattgaacggcgtcgaaatcggtggcggttctttgcgtatctatcaatcc
gatgtacaggaaaaagtatttgccgctatcggtttgtcctcagaggaagcaaaatccaaa
ttcggcttcatgcttgatgcattccaatacggtgcaccgcctcatgcaggctgtgcattc
ggcctcgaccgcttggtaatgttgatggccaaacgtcaatccattcgcgacgtaattgca
ttccctaagacacaaagtgcgagcgacatcatgagtcaggcaccgtccgaagtggaaatg
aaacagttaaaagaattacatattaaaacagatttaggtgaagaaaaattagtgtaa
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