Aliivibrio salmonicida: VSAL_I0177
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Entry
VSAL_I0177 CDS
T00782
Symbol
rmlC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
vsa
Aliivibrio salmonicida
Pathway
vsa00521
Streptomycin biosynthesis
vsa00523
Polyketide sugar unit biosynthesis
vsa00541
O-Antigen nucleotide sugar biosynthesis
vsa01100
Metabolic pathways
vsa01110
Biosynthesis of secondary metabolites
vsa01250
Biosynthesis of nucleotide sugars
Module
vsa_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
vsa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
VSAL_I0177 (rmlC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
VSAL_I0177 (rmlC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
VSAL_I0177 (rmlC)
Enzymes [BR:
vsa01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
VSAL_I0177 (rmlC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
CAQ77862
UniProt:
B6EPD4
LinkDB
All DBs
Position
1:complement(217730..218287)
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AA seq
185 aa
AA seq
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MNVIDTNIPDVKIFEPTVFGDERGFFMETWSQKKFEELVTGKPTQFVQDNHSKSKKGILR
GLHYQTENTQGKLVRVVSGEVFDVVVDIRENSPTFGQWVGTYLSAENKHQLWVPEGFAHG
FYVTSEDAEFVYKCTDYYNPKSEISIAWDDKAIGIEWPITTPPQLSEKDKNAMILSQVTP
IKQED
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgaacgttatagataccaatattcctgatgtaaaaatattcgagccaacggtgtttggg
gatgaacgtgggtttttcatggaaacatggagccagaagaagtttgaagaattagtgacg
ggaaaaccaactcagtttgtacaagataaccattcaaaatctaaaaaagggattttgcgt
ggcttgcattaccaaacagaaaacacccaagggaaactagtacgtgtagtttcaggagag
gtgtttgatgtagtggttgatattcgtgaaaattccccaacctttggtcaatgggttggc
acttatctttctgctgaaaacaaacatcaactctgggtgccagaaggctttgctcatggt
ttttatgtgacaagtgaagacgctgagtttgtctataaatgcacggattattataaccca
aaatcagaaatctcaattgcttgggatgataaggctattggtattgaatggccaatcacg
actccacctcaattatctgagaaagataaaaatgcgatgatattatctcaagtcacaccc
ataaagcaggaggactag
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