Vibrio mediterranei: BSZ05_05085
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Entry
BSZ05_05085 CDS
T04936
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
vsh
Vibrio mediterranei
Pathway
vsh00521
Streptomycin biosynthesis
vsh00523
Polyketide sugar unit biosynthesis
vsh00541
O-Antigen nucleotide sugar biosynthesis
vsh01100
Metabolic pathways
vsh01110
Biosynthesis of secondary metabolites
vsh01250
Biosynthesis of nucleotide sugars
Module
vsh_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
vsh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
BSZ05_05085
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
BSZ05_05085
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
BSZ05_05085
Enzymes [BR:
vsh01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
BSZ05_05085
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
ASI89230
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Position
1:complement(1111241..1111792)
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AA seq
183 aa
AA seq
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MKVIETSIPDVKIIEPQVFGDERGFFMETWQQKKFEELVTGKPTSFVQDNHSKSSKGILR
GLHYQTENTQGKLVRVVSGEVFDVAVDVRKNSPTFGQWVGVYLSAENKRQLWVPEGFAHG
FYVTSDDAEFVYKCTDYYNPTAEHSIVWNDPEIGIEWPIKGEPLLSAKDAQGQSLRQSVS
VVV
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtaatagaaacaagtatcccagatgtaaagattattgagcctcaagtttttggt
gatgagcgcggattctttatggaaacttggcaacagaaaaaattcgaagagctcgtcact
ggcaagccaacatcgtttgttcaagataaccactctaagtcgagcaagggtattttgcgc
ggactgcattatcaaaccgaaaacactcaaggcaagttagtacgagtagtgtccggtgag
gtgtttgacgttgctgtggatgtacgtaaaaactccccgacatttggtcagtgggtaggc
gtatacttatcggcagaaaacaaacgtcaactgtgggtaccagaaggctttgctcatggc
ttttacgtgaccagtgatgatgctgagtttgtgtataaatgcacggattactacaatcca
actgcagagcactctattgtttggaatgatccagaaattgggattgagtggccgataaaa
ggggagcctttgctttccgcgaaggatgctcagggacaaagtttgagacaatcggtttca
gttgttgtttag
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