Vibrio mediterranei: BSZ05_11365
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Entry
BSZ05_11365 CDS
T04936
Name
(GenBank) glutamate decarboxylase
KO
K01580
glutamate decarboxylase [EC:
4.1.1.15
]
Organism
vsh
Vibrio mediterranei
Pathway
vsh00250
Alanine, aspartate and glutamate metabolism
vsh00410
beta-Alanine metabolism
vsh00430
Taurine and hypotaurine metabolism
vsh00650
Butanoate metabolism
vsh01100
Metabolic pathways
vsh01110
Biosynthesis of secondary metabolites
vsh01120
Microbial metabolism in diverse environments
vsh02024
Quorum sensing
Module
vsh_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
vsh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
BSZ05_11365
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
BSZ05_11365
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
BSZ05_11365
00430 Taurine and hypotaurine metabolism
BSZ05_11365
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BSZ05_11365
Enzymes [BR:
vsh01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.15 glutamate decarboxylase
BSZ05_11365
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Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
Motif
Other DBs
NCBI-ProteinID:
ASI90318
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All DBs
Position
1:2404744..2406138
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AA seq
464 aa
AA seq
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MPLHKKSAVRGSMLDDVYSSKDLSVVMPKYRIPENEHAPEHAYQVVHDELMLDGNSRQNL
ATFCQTWVEDEVHQLMDECIDKNMIDKDEYPQTAEIESRCVHMLADLWHAPDAENPMGCS
TTGSSEAAMLGGMALKWAWREKMKKQGKPTDKPNLICGPVQVCWHKFARYWDIELREIPM
EGDRLIMTPEEVIKRCDENTIGVVPTLGVTFTCQYEPVKAVHEALDKLQEETGLDIPIHV
DGASGAFLAPFCDPDLEWDFRLPRVKSINASGHKFGLSPLGVGWVVWRDADALHEDLIFN
VNYLGGNMPTFALNFSRPGGQIVAQYYNFLRLGKEGYKKIHDACYETARYIAKEVEKMGM
FEIIYDGHGGIPALSWSIKKGANPGFNLYDLSDRIRSRGWQIAAYAMPADRQDLVIMRIL
VRHGFSRDMADLLISDLQHCVDFFDKHPVVNGSDADESSNFNHG
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgcctcttcataaaaagtcagctgttcgtggttcaatgttagatgatgtttactcttcc
aaagatttgtcagtggttatgcccaagtatcgaatccctgagaatgagcacgcacctgaa
catgcctatcaagttgttcacgatgaacttatgctagacggtaactcgcgtcagaactta
gcgacattttgtcaaacatgggtagaagatgaagttcatcaattgatggatgaatgcatc
gataagaacatgattgataaagatgagtacccacaaacggccgagatcgaatcgcgttgt
gttcatatgttagcggatctttggcatgcgccagatgcagagaacccaatgggttgttca
acgacggggtcgagtgaagctgcgatgcttggtgggatggcattaaagtgggcttggcgc
gaaaaaatgaagaagcaaggcaaacctaccgacaaaccaaatcttatttgtggcccagta
caggtttgttggcataagtttgcgcgctattgggatattgaacttcgtgagattccaatg
gaaggtgatcgccttatcatgacacctgaagaagtgatcaaacgttgtgacgaaaacact
attggtgtagtgccgactctcggtgtgacgttcacatgccagtatgagccagtaaaagcg
gttcatgaagctctagataagcttcaagaagaaacaggcttagatattccgattcacgtt
gatggcgccagtggtgcgtttttagcgcctttctgtgaccctgatttagaatgggacttc
cgcttgcctcgtgttaaatcgattaatgcttccggccacaaatttgggctttcgccatta
ggtgtgggttgggtcgtgtggcgtgatgctgatgcgttgcatgaggatttgatcttcaat
gtaaactatcttggcggtaacatgccgacatttgcattgaacttctctcgcccaggggga
caaatcgttgcgcagtactacaacttcttaagattgggtaaagaaggctataaaaagatt
catgatgcatgctacgaaacagcacgctacattgccaaagaagttgagaagatgggcatg
tttgaaatcatttacgatggccacggtggtattccggcactaagttggtctatcaagaaa
ggtgcaaacccaggcttcaacctttatgacttatcggatcgcattcgatctcgtggttgg
cagattgcagcgtatgcaatgcctgcggatcgccaagatctggttattatgcgtattctc
gtacgtcacggctttagtcgagacatggcggacttgctgatttctgacttgcaacattgt
gtcgatttctttgataagcacccagtggttaacggcagtgatgccgacgagtcaagcaac
tttaaccacggttaa
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