Vibrio splendidus: LTQ54_04960
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Entry
LTQ54_04960 CDS
T08240
Name
(GenBank) carbohydate-binding domain-containing protein
KO
K12373
hexosaminidase [EC:
3.2.1.52
]
Organism
vsl
Vibrio splendidus
Pathway
vsl00511
Other glycan degradation
vsl00520
Amino sugar and nucleotide sugar metabolism
vsl00600
Sphingolipid metabolism
vsl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vsl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00520 Amino sugar and nucleotide sugar metabolism
LTQ54_04960
09103 Lipid metabolism
00600 Sphingolipid metabolism
LTQ54_04960
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
LTQ54_04960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
vsl03110
]
LTQ54_04960
Enzymes [BR:
vsl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.52 beta-N-acetylhexosaminidase
LTQ54_04960
Chaperones and folding catalysts [BR:
vsl03110
]
Intramolecular chaperones
Others
LTQ54_04960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_20
CHB_HEX
CHB_HEX_C
Glyco_hydro_20b
Motif
Other DBs
NCBI-ProteinID:
UOE85377
LinkDB
All DBs
Position
1:complement(1074997..1077651)
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AA seq
884 aa
AA seq
DB search
MLKRNLLSVAVLAGLTGCAVTQAPEQKVVNALADNLDVQYEILTNHGANEGMACQDLGAE
WASCNKVNMTLTNDGEAIDSKDWTIYFHSIRLILDVDNEQFKITRVTGDLHKLEPTDKFD
GFAAGEEVILPLTSEYWQLFETDFMPGAFVTAPNAEPKMIASLNTEDVASFVTGLEGNNL
KRTPDDNNVMATAVTRFEKNADLATQDVSTTLLPTPMSVEAGEGSVSIAGGIALPKDAFD
AEQFAAIEERADVVNVDVSGDLPVSVAVVPTQFTGDLAKSGAYELSISEEGIVIKAFDKT
GAFYAVQSIFGLIDSQNAESLPQLSIKDAPRFDYRGVMVDVARNFHSKGAILATLDQMAA
YKMNKLHLHLTDDEGWRLEIPGLPELTDVGSNRCFDLEEQSCLLPQLGSGPTTDNFGSGF
FSKADYVEILSYAKARSIEVIPEIDMPAHARSAVVSMEARYTRLMAEGKEAEASEYRLMD
PQDTSNVTTIQFYDKHSFINPCMESSTRFVDKVITEIAAMHNEAGMPLTTWHFGGDEAKN
IKLGAGFQDVDAQDKVAWKGNIELDKQDKPFQQSPQCQSLIADGSVSDFGHLPGYFAKEV
SKIVADKGIPHFQAWQDGLKYVEEGESGFATETTRVNFWDVLYWGGTSSVYDWSAKGYDV
IVSNPDYVYMDMPYEVDAAERGYYWATRATDTRKMFGFAPENMPQNAETSLDRDGNGFSG
KGEIEAKPFYGLSAQLWSETVRTDEQYEYMVFPRVLAAAERAWHRADWENDYKVGVEYSQ
DTDLVNKQALNSDFNRFANIVGQRELAKLEKAGIDYRLPVPGAQVVDGKLAMNVQFPGVE
LQYSADGENWLTYDEQQRPSVSGETYIRSISESGEKVSRVTSVK
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atgttgaagagaaacttactatctgtagcggtactggctggtttaactggttgtgcggta
acacaagcaccagaacaaaaggtggttaatgcactggctgataaccttgatgtgcaatac
gaaatcttgacgaaccacggcgcaaacgaaggcatggcttgtcaggatttaggcgcagag
tgggcatcatgtaacaaagtgaacatgactctgaccaatgacggtgaagcgatcgattcg
aaagattggactatctacttccacagtattcgccttatcttagatgttgataatgagcag
tttaaaatcactcgtgtaacaggcgacctacacaaactagaacctacagataagttcgat
ggttttgccgctggtgaagaagtgattcttccactaacaagtgaatactggcaactgttt
gaaaccgactttatgccgggtgcatttgtaacggcgccaaatgctgaacctaagatgatt
gcttcattgaatacggaagatgtcgcgtcgttcgtaaccggtttggaaggaaacaacctt
aagcgtacacctgatgacaacaatgtcatggcaacagcggttactcgctttgaaaagaat
gctgatctggcaacgcaagatgtatcaaccactttactaccaacgccaatgtcggtagaa
gcgggcgaaggttcagtgagcattgctggtggtattgccctacctaaagacgcattcgat
gctgagcagttcgctgcaattgaagaacgtgcagatgtggtaaacgtagatgtgagtggc
gacctacctgttagtgttgctgttgttcctactcaatttacgggtgatttagcgaaatct
ggcgcttatgaactaagcatctcggaagaggggattgtgattaaagcgtttgataaaaca
ggtgctttctacgcagttcagtctatttttggcctaatagacagtcagaatgctgaatca
ctaccacaactgtcgatcaaagatgcaccgcgctttgattaccgtggtgtgatggtggat
gttgctcgaaacttccattcaaaaggtgccatcctagccacgctagatcaaatggcagcc
tacaagatgaacaaactgcaccttcacttaacggatgatgaaggctggcgtttagaaatc
ccgggtttaccagagctaacggatgtagggtctaatcgttgttttgatttggaagagcaa
agctgtttactgcctcagttaggttcgggtccaacaacagacaactttggctccggtttc
tttagtaaagcggattacgtcgagatcttaagctacgcaaaagcgcgcagcatcgaagta
attccagaaattgatatgccggcacacgctcgttctgctgtggtatcaatggaagctcgt
tacactcgcctaatggcggagggcaaagaagctgaagcaagtgaatatcgcttgatggat
ccacaagatacttcaaacgtgacgacgattcagttctacgataagcatagcttcatcaac
ccatgtatggaatcatcgactcgctttgttgataaagtgattactgaaattgcagcaatg
cacaatgaagcgggcatgccgctaacgacttggcactttggtggcgatgaagcgaaaaac
atcaagctaggcgcaggctttcaagatgttgatgctcaagataaagtggcatggaaaggt
aacattgagctagacaagcaagacaaaccattccaacagtctccacaatgtcagtctttg
attgctgatggttcagtgagtgatttcggtcacctacctggctactttgcaaaagaagta
tcaaaaattgttgcagacaaaggaattcctcacttccaagcttggcaagatggcttgaag
tatgtggaagagggtgaatctggcttcgctactgaaacgactcgcgttaacttctgggac
gttctttactggggcggcacttcatcagtgtacgactggtcagcgaaaggttatgacgtg
attgtctctaacccagattacgtatacatggatatgccatacgaagtagatgcagcagaa
cgtggttactactgggcaacgcgtgcaaccgatactcgtaagatgttcggtttcgcaccg
gaaaacatgccacaaaatgcggaaacgtcattagaccgtgacggcaatggcttcagtggt
aaaggcgagattgaagcgaaacctttctacggtttgtcagcgcagctttggtctgaaact
gtacgtactgacgagcagtatgaatacatggtgttccctcgtgttcttgcagcagcagag
cgtgcatggcaccgagcagattgggaaaacgactacaaagtgggcgttgagtactctcaa
gatactgacttagtgaataagcaggctctaaacagcgactttaatcgcttcgcgaatatt
gttggtcaacgtgagctggctaagctcgagaaagcgggtattgattaccgactaccagtt
ccgggtgctcaggttgttgatggcaagctagcgatgaacgttcaattcccaggcgtagag
cttcaatactctgctgatggtgaaaactggctgacttatgatgagcagcaacgtccttcg
gtttctggtgaaacgtacatccgctctatctctgaaagtggcgagaaagtaagtcgagta
acttcggtaaaataa
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