Vibrio atlanticus: VS_1785
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Entry
VS_1785 CDS
T00812
Name
(GenBank) GGDEF family protein
KO
K20959
diguanylate cyclase [EC:
2.7.7.65
]
Organism
vsp
Vibrio atlanticus
Pathway
vsp05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vsp00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
VS_1785
Enzymes [BR:
vsp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.65 diguanylate cyclase
VS_1785
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Paralog
Gene cluster
GFIT
Motif
Pfam:
GGDEF
CHASE
Motif
Other DBs
NCBI-ProteinID:
CAV18969
UniProt:
B7VPL9
LinkDB
All DBs
Position
1:complement(1910296..1911834)
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AA seq
512 aa
AA seq
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MPQTTDPLTGLKRQTLPLVVFSVSFLITVLCFVLVMLNQKRALNMNLDSFATHQTLSLEA
FIDNDVAYIGSGANFFYANDPENWDKFDRFAKQTIDDSKSLIALQWMQKVPADEIAEHTA
KMKEKYPFFKLYTIPKNQAKTYGYILDGQPAFVASDIFPNTEPNNKVLGFYSSRERFDLV
LDNIKQTRKANISDKVRLIQDGLDKDTKKSGMLVYHPVFEGESDNLLGVVIGVVRTTYYF
ENLLASTVGDMNVYVRVSDVGFEAEDAPVLFETKGYEGVTGQHITKKITLTNREWVVDFK
IDSCISFNGYLVLAGIALVGTTISLLLSYIVKLQVQEKVRLYKMIDERTEELRFLANHDS
LTEIYNRRAFNKVLDKAIQGDKPFSLIGFDVDKFKGINDQFGHPAGDALLVHVIQLISGS
LKEGDHVFRMGGDEFGIISSVIEHDALARYLECILDTVSESHCEHKGQLLSCTLSIGATI
RSKEDIEELLQKTDSMLYLSKSNGRNRVTIAG
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgccccaaactactgacccactaacagggttgaagagacaaactctcccgttggtcgta
ttttcggtcagttttttgattactgttttgtgctttgtattagtcatgcttaatcaaaag
cgtgcgctgaatatgaatttggatagttttgctactcaccagacattgagcttggaagcc
tttatagataatgatgtggcatatattgggtctggtgctaattttttctacgcaaatgac
cctgaaaattgggataagtttgatcgctttgctaagcaaaccatagatgattcaaagagt
ttaattgccttgcagtggatgcaaaaagtgcccgcagacgagatagctgagcacactgcg
aaaatgaaagaaaagtacccattctttaagctgtataccattcctaagaaccaagcaaaa
acctatggctacattttggatggtcagccagctttcgttgctagcgatattttccctaat
acagaaccaaacaacaaagttcttggcttttactcttctagagagcgatttgatctcgtt
ctagataatatcaaacagacacgtaaggcgaatatttcagacaaagttcgcttgatacaa
gatgggctagataaagacacaaaaaagagtggcatgttggtgtatcaccctgtctttgag
ggagagagtgacaacttactcggcgttgtaattggtgtggttcgcaccacatactatttt
gagaacttgctggcttcgacggttggggatatgaatgtttatgtccgcgttagtgatgtc
ggttttgaagccgaagatgcacctgtcttgttcgaaacgaaaggttatgagggtgtgact
ggacaacatatcaccaagaaaatcacactcactaaccgtgaatgggttgtcgacttcaag
atagactcatgcatttcgtttaatggttacctggtgttggccgggattgccctcgtgggc
acgactatttcactgttgctttcttatatcgttaaactgcaagtccaagaaaaagtacgc
ctgtataaaatgattgatgaaagaacggaagaactccgttttcttgccaatcatgacagc
ctcacagagatttataatcgacgagcctttaataaggtgctcgataaagcgatacaaggt
gacaagccgtttagcttgattggatttgatgtcgataaatttaaagggattaatgatcaa
tttggccacccggctggtgatgccttactggttcatgtaattcagttgatttcaggcagt
ttgaaagagggcgatcatgtcttccgtatgggaggagatgagtttggtatcatttcgagc
gtcattgaacacgacgcgctggcacgttatttagaatgtattttagatacggtgagcgag
tctcactgtgagcataaaggtcaactattgagttgtactctaagtatcggtgctaccatc
cgcagtaaagaagacatcgaagagctccttcaaaaaaccgatagtatgctttacctaagt
aagtcaaatggccgaaatcgcgttacaattgcaggctaa
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